Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01651 and H281DRAFT_01652 are separated by 3 nucleotides H281DRAFT_01652 and H281DRAFT_01653 are separated by 160 nucleotides
H281DRAFT_01651: H281DRAFT_01651 - vanillate O-demethylase ferredoxin subunit, at 533,437 to 534,405
_01651
H281DRAFT_01652: H281DRAFT_01652 - DNA-binding transcriptional regulator, LysR family, at 534,409 to 535,329
_01652
H281DRAFT_01653: H281DRAFT_01653 - Phenylpropionate dioxygenase, large terminal subunit, at 535,490 to 536,773
_01653
Position (kb) 534
535
536 Strain fitness (log2 ratio) -1
0
1
2 at 533.542 kb on + strand, within H281DRAFT_01651 at 533.596 kb on + strand, within H281DRAFT_01651 at 533.596 kb on + strand, within H281DRAFT_01651 at 533.775 kb on - strand, within H281DRAFT_01651 at 533.796 kb on + strand at 533.858 kb on - strand, within H281DRAFT_01651 at 534.013 kb on + strand, within H281DRAFT_01651 at 534.366 kb on - strand at 534.402 kb on - strand at 534.602 kb on - strand, within H281DRAFT_01652 at 534.661 kb on - strand, within H281DRAFT_01652 at 534.811 kb on + strand, within H281DRAFT_01652 at 534.811 kb on + strand, within H281DRAFT_01652 at 534.812 kb on - strand, within H281DRAFT_01652 at 534.816 kb on - strand, within H281DRAFT_01652 at 534.837 kb on + strand, within H281DRAFT_01652 at 534.838 kb on - strand, within H281DRAFT_01652 at 534.914 kb on - strand, within H281DRAFT_01652 at 535.473 kb on - strand at 535.505 kb on + strand at 535.506 kb on - strand at 535.571 kb on + strand at 536.123 kb on + strand, within H281DRAFT_01653
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 533,542 + H281DRAFT_01651 0.11 +1.0 533,596 + H281DRAFT_01651 0.16 +1.0 533,596 + H281DRAFT_01651 0.16 -0.3 533,775 - H281DRAFT_01651 0.35 +2.0 533,796 + +0.3 533,858 - H281DRAFT_01651 0.43 +0.0 534,013 + H281DRAFT_01651 0.59 -0.2 534,366 - -0.6 534,402 - +0.3 534,602 - H281DRAFT_01652 0.21 +0.9 534,661 - H281DRAFT_01652 0.27 -0.5 534,811 + H281DRAFT_01652 0.44 -0.7 534,811 + H281DRAFT_01652 0.44 -1.0 534,812 - H281DRAFT_01652 0.44 +1.3 534,816 - H281DRAFT_01652 0.44 +0.3 534,837 + H281DRAFT_01652 0.46 +0.3 534,838 - H281DRAFT_01652 0.47 -0.3 534,914 - H281DRAFT_01652 0.55 -0.1 535,473 - +0.1 535,505 + +1.0 535,506 - +0.0 535,571 + +0.3 536,123 + H281DRAFT_01653 0.49 +0.4
Or see this region's nucleotide sequence