Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01624 and H281DRAFT_01625 are separated by 211 nucleotides H281DRAFT_01625 and H281DRAFT_01626 are separated by 29 nucleotides H281DRAFT_01626 and H281DRAFT_01627 overlap by 1 nucleotides H281DRAFT_01627 and H281DRAFT_01628 overlap by 4 nucleotides
H281DRAFT_01624: H281DRAFT_01624 - Protein of unknown function (DUF3005), at 503,955 to 504,407
_01624
H281DRAFT_01625: H281DRAFT_01625 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 504,619 to 505,224
_01625
H281DRAFT_01626: H281DRAFT_01626 - putative spermidine/putrescine transport system permease protein, at 505,254 to 506,180
_01626
H281DRAFT_01627: H281DRAFT_01627 - carbohydrate ABC transporter membrane protein 1, CUT1 family, at 506,180 to 507,067
_01627
H281DRAFT_01628: H281DRAFT_01628 - putative spermidine/putrescine transport system ATP-binding protein, at 507,064 to 508,143
_01628
Position (kb) 505
506
507 Strain fitness (log2 ratio) -1
0
1
2 at 504.307 kb on - strand, within H281DRAFT_01624 at 504.352 kb on - strand, within H281DRAFT_01624 at 504.375 kb on - strand at 504.405 kb on + strand at 504.670 kb on - strand at 505.121 kb on - strand, within H281DRAFT_01625 at 505.168 kb on + strand at 505.345 kb on + strand at 505.346 kb on - strand at 505.346 kb on - strand at 505.346 kb on - strand at 505.346 kb on - strand at 505.405 kb on + strand, within H281DRAFT_01626 at 505.408 kb on + strand, within H281DRAFT_01626 at 505.408 kb on + strand, within H281DRAFT_01626 at 505.541 kb on - strand, within H281DRAFT_01626 at 505.732 kb on + strand, within H281DRAFT_01626 at 505.925 kb on - strand, within H281DRAFT_01626 at 506.091 kb on + strand at 506.092 kb on - strand at 506.232 kb on - strand at 506.246 kb on + strand at 506.247 kb on - strand at 506.252 kb on + strand at 506.305 kb on - strand, within H281DRAFT_01627 at 506.458 kb on - strand, within H281DRAFT_01627 at 506.458 kb on - strand, within H281DRAFT_01627 at 506.539 kb on - strand, within H281DRAFT_01627 at 506.608 kb on + strand, within H281DRAFT_01627 at 506.609 kb on - strand, within H281DRAFT_01627 at 506.609 kb on - strand at 506.609 kb on - strand, within H281DRAFT_01627 at 506.609 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.896 kb on - strand, within H281DRAFT_01627 at 506.961 kb on + strand, within H281DRAFT_01627 at 507.120 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 504,307 - H281DRAFT_01624 0.78 +0.7 504,352 - H281DRAFT_01624 0.88 +0.3 504,375 - +0.2 504,405 + -0.0 504,670 - -0.6 505,121 - H281DRAFT_01625 0.83 -0.4 505,168 + -0.7 505,345 + +0.4 505,346 - -1.1 505,346 - -0.0 505,346 - -0.3 505,346 - +0.3 505,405 + H281DRAFT_01626 0.16 +0.3 505,408 + H281DRAFT_01626 0.17 -0.5 505,408 + H281DRAFT_01626 0.17 -0.4 505,541 - H281DRAFT_01626 0.31 +0.9 505,732 + H281DRAFT_01626 0.52 -0.4 505,925 - H281DRAFT_01626 0.72 -0.3 506,091 + +0.0 506,092 - -1.7 506,232 - +2.0 506,246 + -0.5 506,247 - +0.6 506,252 + +0.5 506,305 - H281DRAFT_01627 0.14 +0.4 506,458 - H281DRAFT_01627 0.31 -0.2 506,458 - H281DRAFT_01627 0.31 -0.5 506,539 - H281DRAFT_01627 0.40 +0.4 506,608 + H281DRAFT_01627 0.48 +0.8 506,609 - H281DRAFT_01627 0.48 -0.4 506,609 - -0.1 506,609 - H281DRAFT_01627 0.48 +0.4 506,609 - H281DRAFT_01627 0.48 +0.6 506,686 - H281DRAFT_01627 0.57 +1.5 506,686 - H281DRAFT_01627 0.57 +0.4 506,686 - H281DRAFT_01627 0.57 +0.1 506,686 - H281DRAFT_01627 0.57 -0.4 506,686 - H281DRAFT_01627 0.57 -1.2 506,896 - H281DRAFT_01627 0.81 +0.1 506,961 + H281DRAFT_01627 0.88 +0.1 507,120 + +0.0
Or see this region's nucleotide sequence