Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01618 and H281DRAFT_01619 are separated by 297 nucleotides H281DRAFT_01619 and H281DRAFT_01620 are separated by 166 nucleotides H281DRAFT_01620 and H281DRAFT_01621 are separated by 36 nucleotides
H281DRAFT_01618: H281DRAFT_01618 - Outer membrane protein (porin), at 498,992 to 500,143
_01618
H281DRAFT_01619: H281DRAFT_01619 - hypothetical protein, at 500,441 to 500,854
_01619
H281DRAFT_01620: H281DRAFT_01620 - LexA-binding, inner membrane-associated putative hydrolase, at 501,021 to 501,539
_01620
H281DRAFT_01621: H281DRAFT_01621 - transcriptional regulator, AraC family, at 501,576 to 502,424
_01621
Position (kb) 500
501 Strain fitness (log2 ratio) -1
0
1
2 at 499.481 kb on + strand, within H281DRAFT_01618 at 499.481 kb on + strand, within H281DRAFT_01618 at 499.508 kb on + strand, within H281DRAFT_01618 at 499.509 kb on - strand, within H281DRAFT_01618 at 499.571 kb on + strand, within H281DRAFT_01618 at 499.571 kb on + strand, within H281DRAFT_01618 at 499.604 kb on + strand, within H281DRAFT_01618 at 499.605 kb on - strand, within H281DRAFT_01618 at 499.700 kb on + strand, within H281DRAFT_01618 at 499.701 kb on - strand, within H281DRAFT_01618 at 499.701 kb on - strand, within H281DRAFT_01618 at 499.701 kb on - strand at 499.701 kb on - strand, within H281DRAFT_01618 at 499.718 kb on + strand, within H281DRAFT_01618 at 499.718 kb on + strand, within H281DRAFT_01618 at 499.759 kb on + strand, within H281DRAFT_01618 at 499.759 kb on + strand, within H281DRAFT_01618 at 499.844 kb on + strand, within H281DRAFT_01618 at 499.844 kb on + strand, within H281DRAFT_01618 at 499.845 kb on - strand, within H281DRAFT_01618 at 499.899 kb on - strand, within H281DRAFT_01618 at 499.957 kb on + strand, within H281DRAFT_01618 at 499.957 kb on + strand, within H281DRAFT_01618 at 499.958 kb on - strand, within H281DRAFT_01618 at 499.980 kb on - strand, within H281DRAFT_01618 at 500.022 kb on - strand, within H281DRAFT_01618 at 500.022 kb on - strand, within H281DRAFT_01618 at 500.141 kb on + strand at 500.173 kb on + strand at 500.251 kb on + strand at 500.606 kb on + strand, within H281DRAFT_01619 at 500.606 kb on + strand, within H281DRAFT_01619 at 500.607 kb on - strand, within H281DRAFT_01619 at 500.607 kb on - strand, within H281DRAFT_01619 at 500.634 kb on - strand, within H281DRAFT_01619 at 500.732 kb on + strand, within H281DRAFT_01619 at 500.901 kb on - strand at 501.121 kb on - strand, within H281DRAFT_01620 at 501.121 kb on - strand, within H281DRAFT_01620 at 501.303 kb on + strand, within H281DRAFT_01620 at 501.304 kb on - strand, within H281DRAFT_01620 at 501.511 kb on + strand at 501.512 kb on - strand at 501.552 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 499,481 + H281DRAFT_01618 0.42 +0.6 499,481 + H281DRAFT_01618 0.42 +0.7 499,508 + H281DRAFT_01618 0.45 +1.9 499,509 - H281DRAFT_01618 0.45 -0.4 499,571 + H281DRAFT_01618 0.50 +0.5 499,571 + H281DRAFT_01618 0.50 +0.5 499,604 + H281DRAFT_01618 0.53 -0.4 499,605 - H281DRAFT_01618 0.53 +0.5 499,700 + H281DRAFT_01618 0.61 +0.3 499,701 - H281DRAFT_01618 0.62 -0.5 499,701 - H281DRAFT_01618 0.62 -0.0 499,701 - +0.5 499,701 - H281DRAFT_01618 0.62 +0.1 499,718 + H281DRAFT_01618 0.63 +1.3 499,718 + H281DRAFT_01618 0.63 +0.6 499,759 + H281DRAFT_01618 0.67 +0.9 499,759 + H281DRAFT_01618 0.67 +1.1 499,844 + H281DRAFT_01618 0.74 -0.1 499,844 + H281DRAFT_01618 0.74 +0.2 499,845 - H281DRAFT_01618 0.74 -0.0 499,899 - H281DRAFT_01618 0.79 -0.3 499,957 + H281DRAFT_01618 0.84 +1.7 499,957 + H281DRAFT_01618 0.84 -0.5 499,958 - H281DRAFT_01618 0.84 +0.3 499,980 - H281DRAFT_01618 0.86 -0.8 500,022 - H281DRAFT_01618 0.89 -0.9 500,022 - H281DRAFT_01618 0.89 +0.3 500,141 + +2.5 500,173 + +0.7 500,251 + -0.3 500,606 + H281DRAFT_01619 0.40 +1.2 500,606 + H281DRAFT_01619 0.40 -0.3 500,607 - H281DRAFT_01619 0.40 +0.2 500,607 - H281DRAFT_01619 0.40 +0.6 500,634 - H281DRAFT_01619 0.47 +0.3 500,732 + H281DRAFT_01619 0.70 -0.2 500,901 - -0.2 501,121 - H281DRAFT_01620 0.19 +0.6 501,121 - H281DRAFT_01620 0.19 -0.7 501,303 + H281DRAFT_01620 0.54 +0.6 501,304 - H281DRAFT_01620 0.55 +0.5 501,511 + -0.7 501,512 - +0.6 501,552 + +0.3
Or see this region's nucleotide sequence