Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01615 and H281DRAFT_01616 are separated by 180 nucleotides H281DRAFT_01616 and H281DRAFT_01617 are separated by 434 nucleotides H281DRAFT_01617 and H281DRAFT_01618 are separated by 1 nucleotides
H281DRAFT_01615: H281DRAFT_01615 - hypothetical protein, at 495,641 to 497,602
_01615
H281DRAFT_01616: H281DRAFT_01616 - hypothetical protein, at 497,783 to 498,343
_01616
H281DRAFT_01617: H281DRAFT_01617 - hypothetical protein, at 498,778 to 498,990
_01617
H281DRAFT_01618: H281DRAFT_01618 - Outer membrane protein (porin), at 498,992 to 500,143
_01618
Position (kb) 497
498
499 Strain fitness (log2 ratio) -2
-1
0
1
2 at 496.783 kb on - strand, within H281DRAFT_01615 at 496.853 kb on - strand, within H281DRAFT_01615 at 496.872 kb on + strand, within H281DRAFT_01615 at 496.952 kb on - strand, within H281DRAFT_01615 at 497.043 kb on + strand, within H281DRAFT_01615 at 497.044 kb on - strand, within H281DRAFT_01615 at 497.238 kb on + strand, within H281DRAFT_01615 at 497.239 kb on - strand, within H281DRAFT_01615 at 497.307 kb on + strand, within H281DRAFT_01615 at 497.611 kb on - strand at 497.635 kb on + strand at 497.635 kb on + strand at 497.635 kb on + strand at 497.636 kb on - strand at 497.706 kb on + strand at 497.706 kb on + strand at 497.726 kb on - strand at 497.726 kb on - strand at 497.743 kb on + strand at 497.744 kb on - strand at 497.910 kb on + strand, within H281DRAFT_01616 at 497.984 kb on + strand, within H281DRAFT_01616 at 497.985 kb on - strand, within H281DRAFT_01616 at 497.985 kb on - strand, within H281DRAFT_01616 at 497.985 kb on - strand, within H281DRAFT_01616 at 498.380 kb on + strand at 498.380 kb on + strand at 498.557 kb on - strand at 498.649 kb on + strand at 498.650 kb on - strand at 498.711 kb on - strand at 498.751 kb on + strand at 498.811 kb on + strand, within H281DRAFT_01617 at 498.893 kb on + strand, within H281DRAFT_01617 at 499.070 kb on + strand at 499.070 kb on + strand at 499.071 kb on - strand at 499.138 kb on + strand, within H281DRAFT_01618 at 499.160 kb on + strand, within H281DRAFT_01618 at 499.310 kb on + strand, within H281DRAFT_01618
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 496,783 - H281DRAFT_01615 0.58 +0.1 496,853 - H281DRAFT_01615 0.62 +0.6 496,872 + H281DRAFT_01615 0.63 -0.3 496,952 - H281DRAFT_01615 0.67 +0.8 497,043 + H281DRAFT_01615 0.71 +0.2 497,044 - H281DRAFT_01615 0.72 -0.5 497,238 + H281DRAFT_01615 0.81 -0.4 497,239 - H281DRAFT_01615 0.81 -1.8 497,307 + H281DRAFT_01615 0.85 +0.4 497,611 - +0.9 497,635 + +0.7 497,635 + +0.4 497,635 + +0.4 497,636 - -1.1 497,706 + +0.7 497,706 + +2.0 497,726 - +0.5 497,726 - +0.7 497,743 + +0.2 497,744 - +0.7 497,910 + H281DRAFT_01616 0.23 -0.6 497,984 + H281DRAFT_01616 0.36 +0.8 497,985 - H281DRAFT_01616 0.36 +0.0 497,985 - H281DRAFT_01616 0.36 +0.9 497,985 - H281DRAFT_01616 0.36 +0.4 498,380 + -0.8 498,380 + -0.4 498,557 - -0.1 498,649 + +1.5 498,650 - +0.4 498,711 - +0.4 498,751 + -1.0 498,811 + H281DRAFT_01617 0.15 -0.3 498,893 + H281DRAFT_01617 0.54 -0.0 499,070 + -0.0 499,070 + +0.4 499,071 - +0.1 499,138 + H281DRAFT_01618 0.13 +0.4 499,160 + H281DRAFT_01618 0.15 +0.2 499,310 + H281DRAFT_01618 0.28 +0.2
Or see this region's nucleotide sequence