Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01598 and H281DRAFT_01599 are separated by 126 nucleotides H281DRAFT_01599 and H281DRAFT_01600 are separated by 39 nucleotides H281DRAFT_01600 and H281DRAFT_01601 are separated by 228 nucleotides
H281DRAFT_01598: H281DRAFT_01598 - transcriptional regulator, LysR family, at 476,759 to 477,688
_01598
H281DRAFT_01599: H281DRAFT_01599 - GTP cyclohydrolase I, at 477,815 to 478,453
_01599
H281DRAFT_01600: H281DRAFT_01600 - Permease of the drug/metabolite transporter (DMT) superfamily, at 478,493 to 479,401
_01600
H281DRAFT_01601: H281DRAFT_01601 - membrane protein DedA, SNARE-associated domain, at 479,630 to 480,694
_01601
Position (kb) 478
479
480 Strain fitness (log2 ratio) -1
0
1
2 at 477.518 kb on + strand, within H281DRAFT_01598 at 477.519 kb on - strand, within H281DRAFT_01598 at 477.974 kb on + strand, within H281DRAFT_01599 at 477.975 kb on - strand, within H281DRAFT_01599 at 478.451 kb on + strand at 478.452 kb on - strand at 478.601 kb on + strand, within H281DRAFT_01600 at 478.690 kb on - strand, within H281DRAFT_01600 at 478.806 kb on - strand, within H281DRAFT_01600 at 478.937 kb on - strand, within H281DRAFT_01600 at 478.937 kb on - strand, within H281DRAFT_01600 at 479.377 kb on + strand at 479.377 kb on + strand at 479.377 kb on + strand at 479.377 kb on + strand at 479.377 kb on + strand at 479.377 kb on + strand at 479.377 kb on + strand at 479.378 kb on - strand at 479.378 kb on - strand at 479.378 kb on - strand at 479.380 kb on - strand at 479.380 kb on - strand at 479.388 kb on + strand at 479.389 kb on - strand at 479.389 kb on - strand at 479.438 kb on + strand at 479.791 kb on - strand, within H281DRAFT_01601 at 479.852 kb on + strand, within H281DRAFT_01601 at 479.992 kb on + strand, within H281DRAFT_01601 at 480.036 kb on - strand, within H281DRAFT_01601 at 480.036 kb on - strand, within H281DRAFT_01601 at 480.036 kb on - strand, within H281DRAFT_01601
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 477,518 + H281DRAFT_01598 0.82 -0.5 477,519 - H281DRAFT_01598 0.82 -0.2 477,974 + H281DRAFT_01599 0.25 +0.2 477,975 - H281DRAFT_01599 0.25 +0.2 478,451 + -0.3 478,452 - -0.5 478,601 + H281DRAFT_01600 0.12 +1.0 478,690 - H281DRAFT_01600 0.22 +0.1 478,806 - H281DRAFT_01600 0.34 +0.7 478,937 - H281DRAFT_01600 0.49 +1.8 478,937 - H281DRAFT_01600 0.49 +0.1 479,377 + +0.5 479,377 + -0.3 479,377 + -0.7 479,377 + +0.7 479,377 + -0.7 479,377 + -0.6 479,377 + -1.6 479,378 - +0.2 479,378 - +0.8 479,378 - +2.4 479,380 - -0.9 479,380 - -0.2 479,388 + +0.3 479,389 - +0.9 479,389 - +0.3 479,438 + -1.0 479,791 - H281DRAFT_01601 0.15 +0.5 479,852 + H281DRAFT_01601 0.21 +0.3 479,992 + H281DRAFT_01601 0.34 -0.7 480,036 - H281DRAFT_01601 0.38 +0.3 480,036 - H281DRAFT_01601 0.38 -0.8 480,036 - H281DRAFT_01601 0.38 -1.2
Or see this region's nucleotide sequence