Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01552 and H281DRAFT_01553 are separated by 192 nucleotides H281DRAFT_01553 and H281DRAFT_01554 are separated by 148 nucleotides H281DRAFT_01554 and H281DRAFT_01555 are separated by 192 nucleotides H281DRAFT_01555 and H281DRAFT_01556 are separated by 31 nucleotides
H281DRAFT_01552: H281DRAFT_01552 - DNA-binding transcriptional regulator, MarR family, at 425,870 to 426,307
_01552
H281DRAFT_01553: H281DRAFT_01553 - Uncharacterized conserved protein, DUF1330 family, at 426,500 to 426,787
_01553
H281DRAFT_01554: H281DRAFT_01554 - RNA polymerase sigma-70 factor, ECF subfamily, at 426,936 to 427,439
_01554
H281DRAFT_01555: H281DRAFT_01555 - UTP:GlnB (protein PII) uridylyltransferase, at 427,632 to 428,402
_01555
H281DRAFT_01556: H281DRAFT_01556 - UTP:GlnB (protein PII) uridylyltransferase, at 428,434 to 429,090
_01556
Position (kb) 426
427
428 Strain fitness (log2 ratio) -2
-1
0
1 at 426.107 kb on + strand, within H281DRAFT_01552 at 426.298 kb on - strand at 426.350 kb on + strand at 426.501 kb on + strand at 426.501 kb on + strand at 426.775 kb on + strand at 426.777 kb on + strand at 426.777 kb on + strand at 426.777 kb on + strand at 426.778 kb on - strand at 426.778 kb on - strand at 426.778 kb on - strand at 426.778 kb on - strand at 426.792 kb on + strand at 426.792 kb on + strand at 426.820 kb on + strand at 427.081 kb on + strand, within H281DRAFT_01554 at 427.330 kb on - strand, within H281DRAFT_01554 at 427.706 kb on - strand at 427.768 kb on + strand, within H281DRAFT_01555 at 427.768 kb on + strand, within H281DRAFT_01555 at 427.813 kb on + strand, within H281DRAFT_01555 at 428.042 kb on - strand, within H281DRAFT_01555 at 428.162 kb on - strand, within H281DRAFT_01555 at 428.256 kb on + strand, within H281DRAFT_01555
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 426,107 + H281DRAFT_01552 0.54 +0.4 426,298 - -1.1 426,350 + -0.2 426,501 + -0.6 426,501 + +0.7 426,775 + -0.4 426,777 + +0.1 426,777 + -0.6 426,777 + +0.1 426,778 - +0.5 426,778 - +1.0 426,778 - +0.4 426,778 - +0.4 426,792 + -0.5 426,792 + +0.2 426,820 + -0.3 427,081 + H281DRAFT_01554 0.29 +0.2 427,330 - H281DRAFT_01554 0.78 +1.0 427,706 - -1.4 427,768 + H281DRAFT_01555 0.18 -0.9 427,768 + H281DRAFT_01555 0.18 -0.3 427,813 + H281DRAFT_01555 0.23 -0.7 428,042 - H281DRAFT_01555 0.53 +0.1 428,162 - H281DRAFT_01555 0.69 +0.1 428,256 + H281DRAFT_01555 0.81 -1.8
Or see this region's nucleotide sequence