Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01550 and H281DRAFT_01551 are separated by 36 nucleotides H281DRAFT_01551 and H281DRAFT_01552 are separated by 50 nucleotides H281DRAFT_01552 and H281DRAFT_01553 are separated by 192 nucleotides
H281DRAFT_01550: H281DRAFT_01550 - membrane fusion protein, multidrug efflux system, at 423,042 to 424,289
_01550
H281DRAFT_01551: H281DRAFT_01551 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 424,326 to 425,819
_01551
H281DRAFT_01552: H281DRAFT_01552 - DNA-binding transcriptional regulator, MarR family, at 425,870 to 426,307
_01552
H281DRAFT_01553: H281DRAFT_01553 - Uncharacterized conserved protein, DUF1330 family, at 426,500 to 426,787
_01553
Position (kb) 424
425
426 Strain fitness (log2 ratio) -1
0
1 at 423.412 kb on + strand, within H281DRAFT_01550 at 423.893 kb on - strand, within H281DRAFT_01550 at 423.893 kb on - strand, within H281DRAFT_01550 at 423.895 kb on + strand, within H281DRAFT_01550 at 424.100 kb on - strand, within H281DRAFT_01550 at 424.100 kb on - strand, within H281DRAFT_01550 at 424.142 kb on - strand, within H281DRAFT_01550 at 424.144 kb on + strand, within H281DRAFT_01550 at 424.703 kb on + strand, within H281DRAFT_01551 at 424.847 kb on - strand, within H281DRAFT_01551 at 425.369 kb on - strand, within H281DRAFT_01551 at 425.467 kb on + strand, within H281DRAFT_01551 at 425.681 kb on + strand at 425.682 kb on - strand at 426.107 kb on + strand, within H281DRAFT_01552 at 426.298 kb on - strand at 426.350 kb on + strand at 426.501 kb on + strand at 426.501 kb on + strand at 426.775 kb on + strand at 426.777 kb on + strand at 426.777 kb on + strand at 426.777 kb on + strand at 426.778 kb on - strand at 426.778 kb on - strand at 426.778 kb on - strand at 426.778 kb on - strand at 426.792 kb on + strand at 426.792 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 423,412 + H281DRAFT_01550 0.30 -1.6 423,893 - H281DRAFT_01550 0.68 +1.2 423,893 - H281DRAFT_01550 0.68 +0.9 423,895 + H281DRAFT_01550 0.68 +0.2 424,100 - H281DRAFT_01550 0.85 +0.9 424,100 - H281DRAFT_01550 0.85 -0.2 424,142 - H281DRAFT_01550 0.88 +0.6 424,144 + H281DRAFT_01550 0.88 -0.2 424,703 + H281DRAFT_01551 0.25 -1.7 424,847 - H281DRAFT_01551 0.35 +0.1 425,369 - H281DRAFT_01551 0.70 +0.3 425,467 + H281DRAFT_01551 0.76 -1.5 425,681 + +0.0 425,682 - -0.5 426,107 + H281DRAFT_01552 0.54 +0.4 426,298 - -1.1 426,350 + -0.2 426,501 + -0.6 426,501 + +0.7 426,775 + -0.4 426,777 + +0.1 426,777 + -0.6 426,777 + +0.1 426,778 - +0.5 426,778 - +1.0 426,778 - +0.4 426,778 - +0.4 426,792 + -0.5 426,792 + +0.2
Or see this region's nucleotide sequence