Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01482 and H281DRAFT_01483 are separated by 158 nucleotides H281DRAFT_01483 and H281DRAFT_01484 overlap by 25 nucleotides H281DRAFT_01484 and H281DRAFT_01485 are separated by 55 nucleotides H281DRAFT_01485 and H281DRAFT_01486 are separated by 107 nucleotides
H281DRAFT_01482: H281DRAFT_01482 - Uncharacterized conserved protein, at 351,859 to 353,337
_01482
H281DRAFT_01483: H281DRAFT_01483 - hypothetical protein, at 353,496 to 353,771
_01483
H281DRAFT_01484: H281DRAFT_01484 - transcriptional regulator, AraC family, at 353,747 to 354,739
_01484
H281DRAFT_01485: H281DRAFT_01485 - hypothetical protein, at 354,795 to 355,307
_01485
H281DRAFT_01486: H281DRAFT_01486 - hypothetical protein, at 355,415 to 355,915
_01486
Position (kb) 353
354
355 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 352.815 kb on - strand, within H281DRAFT_01482 at 352.866 kb on + strand, within H281DRAFT_01482 at 352.867 kb on - strand, within H281DRAFT_01482 at 352.867 kb on - strand, within H281DRAFT_01482 at 352.887 kb on - strand, within H281DRAFT_01482 at 353.014 kb on - strand, within H281DRAFT_01482 at 353.015 kb on + strand, within H281DRAFT_01482 at 353.015 kb on + strand, within H281DRAFT_01482 at 353.016 kb on - strand, within H281DRAFT_01482 at 353.035 kb on - strand, within H281DRAFT_01482 at 353.035 kb on - strand, within H281DRAFT_01482 at 353.036 kb on + strand, within H281DRAFT_01482 at 353.037 kb on - strand, within H281DRAFT_01482 at 353.125 kb on - strand, within H281DRAFT_01482 at 353.125 kb on - strand, within H281DRAFT_01482 at 353.145 kb on - strand, within H281DRAFT_01482 at 353.638 kb on + strand, within H281DRAFT_01483 at 353.978 kb on - strand, within H281DRAFT_01484 at 354.036 kb on + strand, within H281DRAFT_01484 at 354.036 kb on + strand, within H281DRAFT_01484 at 354.037 kb on - strand, within H281DRAFT_01484 at 354.045 kb on - strand, within H281DRAFT_01484 at 354.068 kb on + strand at 354.725 kb on + strand at 354.725 kb on + strand at 354.725 kb on + strand at 354.726 kb on - strand at 354.726 kb on - strand at 354.726 kb on - strand at 354.726 kb on - strand at 354.828 kb on + strand at 355.001 kb on - strand, within H281DRAFT_01485 at 355.016 kb on - strand, within H281DRAFT_01485 at 355.043 kb on - strand, within H281DRAFT_01485 at 355.250 kb on + strand, within H281DRAFT_01485 at 355.253 kb on + strand, within H281DRAFT_01485 at 355.314 kb on + strand at 355.396 kb on - strand at 355.419 kb on + strand at 355.420 kb on - strand at 355.440 kb on + strand at 355.462 kb on - strand at 355.485 kb on + strand, within H281DRAFT_01486 at 355.609 kb on - strand, within H281DRAFT_01486 at 355.661 kb on - strand, within H281DRAFT_01486 at 355.681 kb on + strand, within H281DRAFT_01486
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 352,815 - H281DRAFT_01482 0.65 +0.8 352,866 + H281DRAFT_01482 0.68 +0.5 352,867 - H281DRAFT_01482 0.68 +0.3 352,867 - H281DRAFT_01482 0.68 -1.4 352,887 - H281DRAFT_01482 0.70 -0.4 353,014 - H281DRAFT_01482 0.78 -0.7 353,015 + H281DRAFT_01482 0.78 +0.1 353,015 + H281DRAFT_01482 0.78 +1.0 353,016 - H281DRAFT_01482 0.78 +0.7 353,035 - H281DRAFT_01482 0.80 -1.6 353,035 - H281DRAFT_01482 0.80 -0.9 353,036 + H281DRAFT_01482 0.80 +0.1 353,037 - H281DRAFT_01482 0.80 +1.0 353,125 - H281DRAFT_01482 0.86 -0.2 353,125 - H281DRAFT_01482 0.86 -0.2 353,145 - H281DRAFT_01482 0.87 +0.2 353,638 + H281DRAFT_01483 0.51 +0.7 353,978 - H281DRAFT_01484 0.23 +1.8 354,036 + H281DRAFT_01484 0.29 +0.8 354,036 + H281DRAFT_01484 0.29 +2.3 354,037 - H281DRAFT_01484 0.29 +0.3 354,045 - H281DRAFT_01484 0.30 +0.8 354,068 + +0.8 354,725 + -0.2 354,725 + +0.1 354,725 + -0.4 354,726 - +0.5 354,726 - -0.6 354,726 - +0.3 354,726 - -0.4 354,828 + +0.2 355,001 - H281DRAFT_01485 0.40 +0.8 355,016 - H281DRAFT_01485 0.43 +0.1 355,043 - H281DRAFT_01485 0.48 -0.6 355,250 + H281DRAFT_01485 0.89 +0.7 355,253 + H281DRAFT_01485 0.89 -0.5 355,314 + +0.4 355,396 - -0.2 355,419 + +0.6 355,420 - +0.0 355,440 + -0.3 355,462 - +0.7 355,485 + H281DRAFT_01486 0.14 -0.0 355,609 - H281DRAFT_01486 0.39 -0.4 355,661 - H281DRAFT_01486 0.49 +1.0 355,681 + H281DRAFT_01486 0.53 -3.0
Or see this region's nucleotide sequence