Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01435

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01434 and H281DRAFT_01435 are separated by 177 nucleotidesH281DRAFT_01435 and H281DRAFT_01436 overlap by 4 nucleotides H281DRAFT_01434: H281DRAFT_01434 - phosphate:Na+ symporter, at 290,841 to 292,538 _01434 H281DRAFT_01435: H281DRAFT_01435 - H+/gluconate symporter, at 292,716 to 294,215 _01435 H281DRAFT_01436: H281DRAFT_01436 - NTE family protein, at 294,212 to 295,270 _01436 Position (kb) 292 293 294 295Strain fitness (log2 ratio) -1 0 1at 291.731 kb on + strand, within H281DRAFT_01434at 291.741 kb on - strand, within H281DRAFT_01434at 292.059 kb on + strand, within H281DRAFT_01434at 292.060 kb on - strand, within H281DRAFT_01434at 292.114 kb on + strand, within H281DRAFT_01434at 292.167 kb on - strand, within H281DRAFT_01434at 292.378 kb on - strandat 292.399 kb on + strandat 292.399 kb on + strandat 292.537 kb on - strandat 292.692 kb on - strandat 293.321 kb on - strand, within H281DRAFT_01435at 293.727 kb on - strand, within H281DRAFT_01435at 293.874 kb on + strand, within H281DRAFT_01435at 294.111 kb on + strandat 294.112 kb on - strandat 294.165 kb on - strandat 294.328 kb on + strand, within H281DRAFT_01436at 294.802 kb on + strand, within H281DRAFT_01436

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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291,731 + H281DRAFT_01434 0.52 +0.6
291,741 - H281DRAFT_01434 0.53 -0.3
292,059 + H281DRAFT_01434 0.72 -0.0
292,060 - H281DRAFT_01434 0.72 -0.3
292,114 + H281DRAFT_01434 0.75 -0.8
292,167 - H281DRAFT_01434 0.78 -1.7
292,378 - -0.4
292,399 + +0.2
292,399 + +0.1
292,537 - +0.6
292,692 - -0.9
293,321 - H281DRAFT_01435 0.40 -0.9
293,727 - H281DRAFT_01435 0.67 +0.5
293,874 + H281DRAFT_01435 0.77 -1.1
294,111 + +0.7
294,112 - -0.2
294,165 - -0.1
294,328 + H281DRAFT_01436 0.11 +0.3
294,802 + H281DRAFT_01436 0.56 +0.4

Or see this region's nucleotide sequence