Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01395 and H281DRAFT_01396 are separated by 134 nucleotides H281DRAFT_01396 and H281DRAFT_01397 are separated by 522 nucleotides H281DRAFT_01397 and H281DRAFT_01398 overlap by 4 nucleotides
H281DRAFT_01395: H281DRAFT_01395 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 250,632 to 252,203
_01395
H281DRAFT_01396: H281DRAFT_01396 - hypothetical protein, at 252,338 to 252,628
_01396
H281DRAFT_01397: H281DRAFT_01397 - hypothetical protein, at 253,151 to 253,396
_01397
H281DRAFT_01398: H281DRAFT_01398 - Formate/nitrite transporter FocA, FNT family, at 253,393 to 254,301
_01398
Position (kb) 252
253 Strain fitness (log2 ratio) -1
0
1 at 251.645 kb on + strand, within H281DRAFT_01395 at 251.646 kb on - strand, within H281DRAFT_01395 at 251.647 kb on + strand, within H281DRAFT_01395 at 251.648 kb on - strand, within H281DRAFT_01395 at 251.648 kb on - strand, within H281DRAFT_01395 at 251.927 kb on + strand, within H281DRAFT_01395 at 252.196 kb on - strand at 252.339 kb on + strand at 252.367 kb on - strand, within H281DRAFT_01396 at 252.367 kb on - strand, within H281DRAFT_01396 at 252.490 kb on + strand, within H281DRAFT_01396 at 252.491 kb on - strand, within H281DRAFT_01396 at 252.667 kb on + strand at 252.736 kb on - strand at 252.745 kb on - strand at 252.857 kb on - strand at 252.954 kb on - strand at 253.082 kb on + strand at 253.082 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 251,645 + H281DRAFT_01395 0.64 +1.0 251,646 - H281DRAFT_01395 0.65 -0.3 251,647 + H281DRAFT_01395 0.65 -0.1 251,648 - H281DRAFT_01395 0.65 -0.0 251,648 - H281DRAFT_01395 0.65 -0.2 251,927 + H281DRAFT_01395 0.82 -0.1 252,196 - -0.3 252,339 + -0.3 252,367 - H281DRAFT_01396 0.10 -0.4 252,367 - H281DRAFT_01396 0.10 -0.6 252,490 + H281DRAFT_01396 0.52 -0.0 252,491 - H281DRAFT_01396 0.53 -0.5 252,667 + +0.1 252,736 - +1.1 252,745 - -0.8 252,857 - +0.2 252,954 - +0.8 253,082 + +0.9 253,082 + -0.2
Or see this region's nucleotide sequence