Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01260 and H281DRAFT_01261 overlap by 14 nucleotides H281DRAFT_01261 and H281DRAFT_01262 are separated by 16 nucleotides H281DRAFT_01262 and H281DRAFT_01263 overlap by 4 nucleotides
H281DRAFT_01260: H281DRAFT_01260 - putative spermidine/putrescine transport system ATP-binding protein, at 94,399 to 95,478
_01260
H281DRAFT_01261: H281DRAFT_01261 - putative spermidine/putrescine transport system permease protein, at 95,465 to 96,337
_01261
H281DRAFT_01262: H281DRAFT_01262 - putative spermidine/putrescine transport system permease protein, at 96,354 to 97,151
_01262
H281DRAFT_01263: H281DRAFT_01263 - Glycine/D-amino acid oxidase (deaminating), at 97,148 to 98,299
_01263
Position (kb) 96
97
98 Strain fitness (log2 ratio) -1
0
1
2 at 95.547 kb on + strand at 95.660 kb on + strand, within H281DRAFT_01261 at 95.664 kb on - strand, within H281DRAFT_01261 at 97.014 kb on + strand, within H281DRAFT_01262 at 97.203 kb on + strand at 97.236 kb on - strand at 97.432 kb on - strand, within H281DRAFT_01263 at 97.773 kb on - strand, within H281DRAFT_01263 at 97.773 kb on - strand, within H281DRAFT_01263 at 97.996 kb on + strand, within H281DRAFT_01263 at 98.093 kb on + strand, within H281DRAFT_01263 at 98.094 kb on - strand, within H281DRAFT_01263
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 95,547 + +0.3 95,660 + H281DRAFT_01261 0.22 +0.3 95,664 - H281DRAFT_01261 0.23 +0.8 97,014 + H281DRAFT_01262 0.83 +1.2 97,203 + -0.3 97,236 - +0.0 97,432 - H281DRAFT_01263 0.25 -1.1 97,773 - H281DRAFT_01263 0.54 -0.9 97,773 - H281DRAFT_01263 0.54 -0.0 97,996 + H281DRAFT_01263 0.74 -0.5 98,093 + H281DRAFT_01263 0.82 +2.4 98,094 - H281DRAFT_01263 0.82 -0.3
Or see this region's nucleotide sequence