Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01256 and H281DRAFT_01257 are separated by 231 nucleotides H281DRAFT_01257 and H281DRAFT_01258 are separated by 47 nucleotides H281DRAFT_01258 and H281DRAFT_01259 are separated by 156 nucleotides
H281DRAFT_01256: H281DRAFT_01256 - hypothetical protein, at 91,109 to 91,486
_01256
H281DRAFT_01257: H281DRAFT_01257 - Catechol 2,3-dioxygenase, at 91,718 to 92,116
_01257
H281DRAFT_01258: H281DRAFT_01258 - transcriptional regulator, LysR family, at 92,164 to 93,117
_01258
H281DRAFT_01259: H281DRAFT_01259 - putative spermidine/putrescine transport system substrate-binding protein, at 93,274 to 94,341
_01259
Position (kb) 92
93
94 Strain fitness (log2 ratio) -2
-1
0
1 at 91.174 kb on - strand, within H281DRAFT_01256 at 91.225 kb on + strand, within H281DRAFT_01256 at 91.226 kb on - strand, within H281DRAFT_01256 at 91.501 kb on + strand at 91.563 kb on + strand at 91.700 kb on + strand at 91.701 kb on - strand at 91.701 kb on - strand at 91.802 kb on + strand, within H281DRAFT_01257 at 92.115 kb on - strand at 92.737 kb on - strand, within H281DRAFT_01258 at 92.771 kb on - strand, within H281DRAFT_01258 at 93.135 kb on + strand at 93.169 kb on + strand at 93.174 kb on - strand at 93.388 kb on + strand, within H281DRAFT_01259 at 93.388 kb on + strand, within H281DRAFT_01259 at 93.389 kb on - strand, within H281DRAFT_01259 at 93.462 kb on + strand, within H281DRAFT_01259 at 93.574 kb on + strand, within H281DRAFT_01259 at 93.575 kb on - strand, within H281DRAFT_01259 at 93.812 kb on - strand, within H281DRAFT_01259 at 93.812 kb on - strand, within H281DRAFT_01259 at 93.954 kb on + strand, within H281DRAFT_01259
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 91,174 - H281DRAFT_01256 0.17 -0.6 91,225 + H281DRAFT_01256 0.31 -2.2 91,226 - H281DRAFT_01256 0.31 -0.2 91,501 + -0.1 91,563 + +0.2 91,700 + -0.2 91,701 - +0.9 91,701 - +0.3 91,802 + H281DRAFT_01257 0.21 +0.5 92,115 - +1.0 92,737 - H281DRAFT_01258 0.60 +0.4 92,771 - H281DRAFT_01258 0.64 -0.4 93,135 + +0.6 93,169 + -0.3 93,174 - -0.6 93,388 + H281DRAFT_01259 0.11 +0.5 93,388 + H281DRAFT_01259 0.11 +1.0 93,389 - H281DRAFT_01259 0.11 -0.6 93,462 + H281DRAFT_01259 0.18 +0.5 93,574 + H281DRAFT_01259 0.28 +0.3 93,575 - H281DRAFT_01259 0.28 +0.0 93,812 - H281DRAFT_01259 0.50 -0.4 93,812 - H281DRAFT_01259 0.50 -1.5 93,954 + H281DRAFT_01259 0.64 +0.4
Or see this region's nucleotide sequence