Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01215 and H281DRAFT_01216 are separated by 526 nucleotides H281DRAFT_01216 and H281DRAFT_01217 are separated by 163 nucleotides H281DRAFT_01217 and H281DRAFT_01218 are separated by 382 nucleotides
H281DRAFT_01215: H281DRAFT_01215 - hypothetical protein, at 54,218 to 54,436
_01215
H281DRAFT_01216: H281DRAFT_01216 - hypothetical protein, at 54,963 to 55,250
_01216
H281DRAFT_01217: H281DRAFT_01217 - bacterial translation initiation factor 1 (bIF-1), at 55,414 to 55,689
_01217
H281DRAFT_01218: H281DRAFT_01218 - response regulator receiver and ANTAR domain protein, at 56,072 to 56,647
_01218
Position (kb)
55
56 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 54.567 kb on - strand at 54.570 kb on + strand at 54.570 kb on + strand at 54.570 kb on + strand at 54.589 kb on - strand at 54.595 kb on - strand at 54.946 kb on + strand at 54.946 kb on + strand at 54.947 kb on - strand at 54.947 kb on - strand at 54.956 kb on + strand at 54.956 kb on + strand at 54.957 kb on - strand at 54.960 kb on + strand at 54.960 kb on + strand at 54.960 kb on + strand at 54.960 kb on + strand at 54.960 kb on + strand at 54.961 kb on - strand at 54.961 kb on - strand at 54.961 kb on - strand at 54.961 kb on - strand at 54.962 kb on + strand at 54.962 kb on + strand at 54.962 kb on + strand at 54.962 kb on + strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.968 kb on + strand at 54.968 kb on + strand at 54.968 kb on + strand at 54.969 kb on - strand at 54.991 kb on - strand at 54.991 kb on - strand at 54.991 kb on - strand at 55.000 kb on - strand, within H281DRAFT_01216 at 55.071 kb on + strand, within H281DRAFT_01216 at 55.143 kb on + strand, within H281DRAFT_01216 at 55.143 kb on + strand, within H281DRAFT_01216 at 55.282 kb on + strand at 55.282 kb on + strand at 55.295 kb on + strand at 55.351 kb on + strand at 55.409 kb on + strand at 55.409 kb on + strand at 55.410 kb on - strand at 55.506 kb on - strand, within H281DRAFT_01217 at 55.506 kb on - strand, within H281DRAFT_01217 at 55.516 kb on + strand, within H281DRAFT_01217 at 55.516 kb on + strand, within H281DRAFT_01217 at 55.546 kb on - strand, within H281DRAFT_01217 at 56.002 kb on + strand at 56.003 kb on - strand at 56.003 kb on - strand at 56.028 kb on - strand at 56.066 kb on + strand at 56.067 kb on - strand at 56.121 kb on + strand at 56.122 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 54,567 - -1.4 54,570 + -1.3 54,570 + +0.1 54,570 + +1.4 54,589 - +0.1 54,595 - +1.9 54,946 + +0.2 54,946 + +0.4 54,947 - +0.8 54,947 - +0.2 54,956 + -0.7 54,956 + -0.1 54,957 - -0.9 54,960 + +0.8 54,960 + +1.8 54,960 + +0.2 54,960 + -0.4 54,960 + +0.3 54,961 - +0.1 54,961 - +1.0 54,961 - -0.5 54,961 - +0.1 54,962 + -0.4 54,962 + +1.2 54,962 + -0.2 54,962 + -0.3 54,963 - +0.7 54,963 - -0.4 54,963 - +0.1 54,963 - +1.7 54,963 - -0.2 54,963 - -0.3 54,968 + -0.3 54,968 + +0.5 54,968 + +0.1 54,969 - -0.8 54,991 - +0.5 54,991 - +0.8 54,991 - +0.3 55,000 - H281DRAFT_01216 0.13 +0.4 55,071 + H281DRAFT_01216 0.38 -0.7 55,143 + H281DRAFT_01216 0.62 +0.3 55,143 + H281DRAFT_01216 0.62 +0.5 55,282 + +0.4 55,282 + +0.0 55,295 + -0.3 55,351 + +1.1 55,409 + -2.9 55,409 + +1.3 55,410 - -0.1 55,506 - H281DRAFT_01217 0.33 -0.1 55,506 - H281DRAFT_01217 0.33 +0.7 55,516 + H281DRAFT_01217 0.37 +0.3 55,516 + H281DRAFT_01217 0.37 +0.8 55,546 - H281DRAFT_01217 0.48 +0.1 56,002 + +0.1 56,003 - +1.0 56,003 - +0.4 56,028 - +0.4 56,066 + +1.4 56,067 - +0.4 56,121 + -1.2 56,122 - +0.3
Or see this region's nucleotide sequence