Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01002 and H281DRAFT_01003 are separated by 63 nucleotides H281DRAFT_01003 and H281DRAFT_01004 are separated by 556 nucleotides H281DRAFT_01004 and H281DRAFT_01005 are separated by 349 nucleotides
H281DRAFT_01002: H281DRAFT_01002 - two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ, at 1,127,799 to 1,129,046
_01002
H281DRAFT_01003: H281DRAFT_01003 - hypothetical protein, at 1,129,110 to 1,129,274
_01003
H281DRAFT_01004: H281DRAFT_01004 - putative iron-dependent peroxidase, at 1,129,831 to 1,130,799
_01004
H281DRAFT_01005: H281DRAFT_01005 - PilZ domain-containing protein, at 1,131,149 to 1,132,036
_01005
Position (kb)
1129
1130
1131 Strain fitness (log2 ratio)
-1
0
1 at 1129.274 kb on + strand at 1129.296 kb on - strand at 1129.358 kb on - strand at 1129.358 kb on - strand at 1129.383 kb on - strand at 1129.393 kb on + strand at 1129.423 kb on + strand at 1129.424 kb on - strand at 1129.591 kb on - strand at 1130.327 kb on + strand, within H281DRAFT_01004 at 1130.328 kb on - strand, within H281DRAFT_01004 at 1130.328 kb on - strand, within H281DRAFT_01004 at 1130.399 kb on - strand, within H281DRAFT_01004 at 1130.563 kb on - strand, within H281DRAFT_01004 at 1130.617 kb on + strand, within H281DRAFT_01004 at 1130.618 kb on - strand, within H281DRAFT_01004 at 1130.618 kb on - strand, within H281DRAFT_01004 at 1130.698 kb on + strand, within H281DRAFT_01004 at 1130.731 kb on - strand at 1131.135 kb on + strand at 1131.495 kb on - strand, within H281DRAFT_01005
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 1,129,274 + -0.5 1,129,296 - +0.2 1,129,358 - -0.7 1,129,358 - -0.7 1,129,383 - +0.7 1,129,393 + +0.4 1,129,423 + -1.2 1,129,424 - +0.6 1,129,591 - -0.1 1,130,327 + H281DRAFT_01004 0.51 +0.2 1,130,328 - H281DRAFT_01004 0.51 +1.6 1,130,328 - H281DRAFT_01004 0.51 -0.3 1,130,399 - H281DRAFT_01004 0.59 -1.7 1,130,563 - H281DRAFT_01004 0.76 +0.6 1,130,617 + H281DRAFT_01004 0.81 +0.3 1,130,618 - H281DRAFT_01004 0.81 -0.7 1,130,618 - H281DRAFT_01004 0.81 +0.1 1,130,698 + H281DRAFT_01004 0.89 -0.1 1,130,731 - +0.9 1,131,135 + +0.9 1,131,495 - H281DRAFT_01005 0.39 +0.0
Or see this region's nucleotide sequence