Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00973 and H281DRAFT_00974 are separated by 0 nucleotides H281DRAFT_00974 and H281DRAFT_00975 are separated by 58 nucleotides
H281DRAFT_00973: H281DRAFT_00973 - Sugar phosphate permease, at 1,090,476 to 1,091,840
_00973
H281DRAFT_00974: H281DRAFT_00974 - L-alanine-DL-glutamate epimerase, at 1,091,841 to 1,093,058
_00974
H281DRAFT_00975: H281DRAFT_00975 - choline dehydrogenase, at 1,093,117 to 1,094,778
_00975
Position (kb)
1091
1092
1093
1094 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1091.110 kb on - strand, within H281DRAFT_00973 at 1091.365 kb on + strand, within H281DRAFT_00973 at 1091.665 kb on + strand, within H281DRAFT_00973 at 1091.709 kb on + strand at 1091.734 kb on + strand at 1091.760 kb on + strand at 1091.838 kb on + strand at 1091.839 kb on - strand at 1091.905 kb on - strand at 1092.087 kb on - strand, within H281DRAFT_00974 at 1092.228 kb on + strand, within H281DRAFT_00974 at 1092.229 kb on - strand, within H281DRAFT_00974 at 1092.229 kb on - strand, within H281DRAFT_00974 at 1092.229 kb on - strand, within H281DRAFT_00974 at 1092.265 kb on - strand, within H281DRAFT_00974 at 1092.352 kb on - strand, within H281DRAFT_00974 at 1092.745 kb on - strand, within H281DRAFT_00974 at 1092.772 kb on - strand, within H281DRAFT_00974 at 1093.075 kb on + strand at 1093.076 kb on - strand at 1093.113 kb on + strand at 1093.113 kb on + strand at 1093.114 kb on - strand at 1093.114 kb on - strand at 1093.130 kb on - strand at 1093.273 kb on + strand at 1093.300 kb on + strand, within H281DRAFT_00975 at 1093.300 kb on + strand, within H281DRAFT_00975 at 1093.300 kb on + strand, within H281DRAFT_00975 at 1093.303 kb on + strand, within H281DRAFT_00975 at 1093.342 kb on + strand, within H281DRAFT_00975 at 1093.714 kb on + strand, within H281DRAFT_00975 at 1094.015 kb on - strand, within H281DRAFT_00975
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 1,091,110 - H281DRAFT_00973 0.46 +0.2 1,091,365 + H281DRAFT_00973 0.65 +0.3 1,091,665 + H281DRAFT_00973 0.87 +0.1 1,091,709 + -0.4 1,091,734 + -0.0 1,091,760 + -0.2 1,091,838 + -1.1 1,091,839 - -0.3 1,091,905 - +3.0 1,092,087 - H281DRAFT_00974 0.20 -1.5 1,092,228 + H281DRAFT_00974 0.32 -0.6 1,092,229 - H281DRAFT_00974 0.32 +1.2 1,092,229 - H281DRAFT_00974 0.32 +1.7 1,092,229 - H281DRAFT_00974 0.32 -0.7 1,092,265 - H281DRAFT_00974 0.35 -0.4 1,092,352 - H281DRAFT_00974 0.42 -2.5 1,092,745 - H281DRAFT_00974 0.74 -2.7 1,092,772 - H281DRAFT_00974 0.76 +0.8 1,093,075 + +0.6 1,093,076 - +2.0 1,093,113 + +1.1 1,093,113 + +0.5 1,093,114 - +0.3 1,093,114 - +0.3 1,093,130 - +0.2 1,093,273 + -0.7 1,093,300 + H281DRAFT_00975 0.11 +0.9 1,093,300 + H281DRAFT_00975 0.11 +0.2 1,093,300 + H281DRAFT_00975 0.11 +0.4 1,093,303 + H281DRAFT_00975 0.11 +0.2 1,093,342 + H281DRAFT_00975 0.14 +1.8 1,093,714 + H281DRAFT_00975 0.36 +0.8 1,094,015 - H281DRAFT_00975 0.54 +0.1
Or see this region's nucleotide sequence