Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00908 and H281DRAFT_00909 are separated by 199 nucleotides H281DRAFT_00909 and H281DRAFT_00910 are separated by 164 nucleotides H281DRAFT_00910 and H281DRAFT_00911 are separated by 10 nucleotides
H281DRAFT_00908: H281DRAFT_00908 - D-amino-acid dehydrogenase, at 1,006,718 to 1,008,016
_00908
H281DRAFT_00909: H281DRAFT_00909 - phosphoribosylformylglycinamidine synthase, at 1,008,216 to 1,012,487
_00909
H281DRAFT_00910: H281DRAFT_00910 - peptidyl-prolyl cis-trans isomerase C, at 1,012,652 to 1,013,431
_00910
H281DRAFT_00911: H281DRAFT_00911 - transcriptional regulator, BolA protein family, at 1,013,442 to 1,013,753
_00911
Position (kb)
1008
1009
1010
1011
1012
1013 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1007.509 kb on - strand, within H281DRAFT_00908 at 1007.509 kb on - strand, within H281DRAFT_00908 at 1007.895 kb on + strand at 1007.896 kb on - strand at 1007.896 kb on - strand at 1007.961 kb on - strand at 1007.961 kb on - strand at 1007.968 kb on - strand at 1008.140 kb on - strand at 1008.140 kb on - strand at 1008.197 kb on + strand at 1008.267 kb on - strand at 1008.311 kb on + strand at 1008.313 kb on + strand at 1008.314 kb on - strand at 1008.507 kb on + strand at 1008.579 kb on + strand at 1008.580 kb on - strand at 1008.994 kb on - strand, within H281DRAFT_00909 at 1008.994 kb on - strand, within H281DRAFT_00909 at 1011.083 kb on + strand, within H281DRAFT_00909 at 1011.172 kb on - strand, within H281DRAFT_00909 at 1011.172 kb on - strand, within H281DRAFT_00909 at 1011.461 kb on - strand, within H281DRAFT_00909 at 1011.520 kb on - strand, within H281DRAFT_00909 at 1011.772 kb on - strand, within H281DRAFT_00909 at 1012.625 kb on - strand at 1012.647 kb on - strand at 1012.654 kb on - strand at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1013.038 kb on - strand, within H281DRAFT_00910 at 1013.477 kb on - strand, within H281DRAFT_00911 at 1013.477 kb on - strand, within H281DRAFT_00911
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 1,007,509 - H281DRAFT_00908 0.61 +0.2 1,007,509 - H281DRAFT_00908 0.61 -1.1 1,007,895 + -0.0 1,007,896 - -0.8 1,007,896 - -0.8 1,007,961 - -0.5 1,007,961 - -0.7 1,007,968 - +0.2 1,008,140 - -0.1 1,008,140 - +0.3 1,008,197 + +0.2 1,008,267 - +0.8 1,008,311 + +0.0 1,008,313 + -0.3 1,008,314 - +0.2 1,008,507 + -3.4 1,008,579 + -3.9 1,008,580 - -2.8 1,008,994 - H281DRAFT_00909 0.18 -2.4 1,008,994 - H281DRAFT_00909 0.18 -2.7 1,011,083 + H281DRAFT_00909 0.67 +0.6 1,011,172 - H281DRAFT_00909 0.69 +2.0 1,011,172 - H281DRAFT_00909 0.69 -2.0 1,011,461 - H281DRAFT_00909 0.76 -1.0 1,011,520 - H281DRAFT_00909 0.77 -3.3 1,011,772 - H281DRAFT_00909 0.83 -2.7 1,012,625 - +0.3 1,012,647 - -0.7 1,012,654 - +0.2 1,012,875 + H281DRAFT_00910 0.29 -0.9 1,012,875 + H281DRAFT_00910 0.29 -0.9 1,012,875 + H281DRAFT_00910 0.29 -1.8 1,012,875 + H281DRAFT_00910 0.29 -0.8 1,012,875 + H281DRAFT_00910 0.29 +0.3 1,012,876 - H281DRAFT_00910 0.29 +0.1 1,012,876 - H281DRAFT_00910 0.29 -0.7 1,012,876 - H281DRAFT_00910 0.29 -0.5 1,012,876 - H281DRAFT_00910 0.29 -0.0 1,013,038 - H281DRAFT_00910 0.49 +0.5 1,013,477 - H281DRAFT_00911 0.11 +1.0 1,013,477 - H281DRAFT_00911 0.11 -0.7
Or see this region's nucleotide sequence