Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00852 and H281DRAFT_00853 are separated by 201 nucleotides H281DRAFT_00853 and H281DRAFT_00854 are separated by 129 nucleotides H281DRAFT_00854 and H281DRAFT_00855 are separated by 241 nucleotides
H281DRAFT_00852: H281DRAFT_00852 - acetyl-CoA acetyltransferase, at 942,242 to 943,423
_00852
H281DRAFT_00853: H281DRAFT_00853 - 3-oxoacyl-[acyl-carrier-protein] reductase /acetoacetyl-CoA reductase, at 943,625 to 944,365
_00853
H281DRAFT_00854: H281DRAFT_00854 - polyhydroxyalkanoate synthesis repressor PhaR, at 944,495 to 945,118
_00854
H281DRAFT_00855: H281DRAFT_00855 - SSU ribosomal protein S12P methylthiotransferase, at 945,360 to 946,751
_00855
Position (kb) 943
944
945 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.705 kb on - strand, within H281DRAFT_00852 at 943.076 kb on + strand, within H281DRAFT_00852 at 943.222 kb on - strand, within H281DRAFT_00852 at 943.222 kb on - strand, within H281DRAFT_00852 at 943.225 kb on + strand, within H281DRAFT_00852 at 943.225 kb on + strand, within H281DRAFT_00852 at 943.225 kb on + strand at 943.226 kb on - strand, within H281DRAFT_00852 at 943.226 kb on - strand, within H281DRAFT_00852 at 943.378 kb on + strand at 943.378 kb on + strand at 943.379 kb on - strand at 943.510 kb on + strand at 943.510 kb on + strand at 943.644 kb on - strand at 943.644 kb on - strand at 943.644 kb on - strand at 943.647 kb on + strand at 943.648 kb on - strand at 943.707 kb on - strand, within H281DRAFT_00853 at 943.707 kb on - strand, within H281DRAFT_00853 at 944.473 kb on + strand at 944.473 kb on + strand at 944.492 kb on + strand at 944.493 kb on - strand at 944.500 kb on + strand at 944.500 kb on + strand at 944.501 kb on - strand at 944.501 kb on - strand at 944.503 kb on + strand at 944.503 kb on + strand at 944.504 kb on - strand at 944.504 kb on - strand at 944.504 kb on - strand at 944.506 kb on + strand at 944.558 kb on + strand, within H281DRAFT_00854 at 944.559 kb on - strand, within H281DRAFT_00854 at 944.579 kb on + strand, within H281DRAFT_00854 at 944.580 kb on - strand, within H281DRAFT_00854 at 944.580 kb on - strand, within H281DRAFT_00854 at 944.789 kb on + strand, within H281DRAFT_00854 at 944.789 kb on + strand, within H281DRAFT_00854 at 944.789 kb on + strand, within H281DRAFT_00854 at 944.790 kb on - strand, within H281DRAFT_00854 at 944.790 kb on - strand, within H281DRAFT_00854 at 944.858 kb on + strand, within H281DRAFT_00854 at 944.942 kb on + strand, within H281DRAFT_00854 at 944.943 kb on - strand, within H281DRAFT_00854 at 945.230 kb on - strand at 945.345 kb on - strand at 945.360 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 942,696 - H281DRAFT_00852 0.38 -1.4 942,696 - H281DRAFT_00852 0.38 -1.1 942,696 - H281DRAFT_00852 0.38 -1.3 942,696 - H281DRAFT_00852 0.38 -1.2 942,705 - H281DRAFT_00852 0.39 -0.6 943,076 + H281DRAFT_00852 0.71 -0.7 943,222 - H281DRAFT_00852 0.83 -1.5 943,222 - H281DRAFT_00852 0.83 -1.7 943,225 + H281DRAFT_00852 0.83 -0.4 943,225 + H281DRAFT_00852 0.83 +1.8 943,225 + +3.2 943,226 - H281DRAFT_00852 0.83 -0.5 943,226 - H281DRAFT_00852 0.83 -3.4 943,378 + -2.4 943,378 + +0.1 943,379 - -1.5 943,510 + +0.2 943,510 + +1.3 943,644 - -2.5 943,644 - -2.1 943,644 - -2.0 943,647 + +0.2 943,648 - -2.5 943,707 - H281DRAFT_00853 0.11 -1.5 943,707 - H281DRAFT_00853 0.11 -2.1 944,473 + +0.5 944,473 + +0.8 944,492 + -1.2 944,493 - -1.1 944,500 + +0.4 944,500 + -0.8 944,501 - -0.4 944,501 - -1.1 944,503 + -0.9 944,503 + -0.3 944,504 - -2.5 944,504 - -0.6 944,504 - -0.0 944,506 + +0.1 944,558 + H281DRAFT_00854 0.10 -0.0 944,559 - H281DRAFT_00854 0.10 -1.5 944,579 + H281DRAFT_00854 0.13 -1.7 944,580 - H281DRAFT_00854 0.14 -1.1 944,580 - H281DRAFT_00854 0.14 -1.7 944,789 + H281DRAFT_00854 0.47 -1.0 944,789 + H281DRAFT_00854 0.47 -1.9 944,789 + H281DRAFT_00854 0.47 -1.6 944,790 - H281DRAFT_00854 0.47 -2.0 944,790 - H281DRAFT_00854 0.47 -3.0 944,858 + H281DRAFT_00854 0.58 +0.3 944,942 + H281DRAFT_00854 0.72 -0.4 944,943 - H281DRAFT_00854 0.72 -0.0 945,230 - -0.1 945,345 - -0.6 945,360 - +1.3
Or see this region's nucleotide sequence