Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00851 and H281DRAFT_00852 are separated by 125 nucleotides H281DRAFT_00852 and H281DRAFT_00853 are separated by 201 nucleotides
H281DRAFT_00851: H281DRAFT_00851 - polyhydroxyalkanoate synthase, at 940,356 to 942,116
_00851
H281DRAFT_00852: H281DRAFT_00852 - acetyl-CoA acetyltransferase, at 942,242 to 943,423
_00852
H281DRAFT_00853: H281DRAFT_00853 - 3-oxoacyl-[acyl-carrier-protein] reductase /acetoacetyl-CoA reductase, at 943,625 to 944,365
_00853
Position (kb) 942
943
944 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 941.293 kb on + strand, within H281DRAFT_00851 at 941.405 kb on - strand, within H281DRAFT_00851 at 941.566 kb on - strand, within H281DRAFT_00851 at 941.605 kb on - strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.663 kb on + strand, within H281DRAFT_00851 at 941.663 kb on + strand, within H281DRAFT_00851 at 941.663 kb on + strand, within H281DRAFT_00851 at 941.664 kb on - strand, within H281DRAFT_00851 at 941.668 kb on - strand, within H281DRAFT_00851 at 941.668 kb on - strand, within H281DRAFT_00851 at 941.668 kb on - strand, within H281DRAFT_00851 at 941.705 kb on + strand, within H281DRAFT_00851 at 941.706 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.778 kb on - strand, within H281DRAFT_00851 at 941.778 kb on - strand, within H281DRAFT_00851 at 941.799 kb on + strand, within H281DRAFT_00851 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.705 kb on - strand, within H281DRAFT_00852 at 943.076 kb on + strand, within H281DRAFT_00852 at 943.222 kb on - strand, within H281DRAFT_00852 at 943.222 kb on - strand, within H281DRAFT_00852 at 943.225 kb on + strand, within H281DRAFT_00852 at 943.225 kb on + strand, within H281DRAFT_00852 at 943.225 kb on + strand at 943.226 kb on - strand, within H281DRAFT_00852 at 943.226 kb on - strand, within H281DRAFT_00852 at 943.378 kb on + strand at 943.378 kb on + strand at 943.379 kb on - strand at 943.510 kb on + strand at 943.510 kb on + strand at 943.644 kb on - strand at 943.644 kb on - strand at 943.644 kb on - strand at 943.647 kb on + strand at 943.648 kb on - strand at 943.707 kb on - strand, within H281DRAFT_00853 at 943.707 kb on - strand, within H281DRAFT_00853
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 941,293 + H281DRAFT_00851 0.53 -2.5 941,405 - H281DRAFT_00851 0.60 -0.4 941,566 - H281DRAFT_00851 0.69 -1.4 941,605 - H281DRAFT_00851 0.71 -1.8 941,643 + H281DRAFT_00851 0.73 -0.0 941,643 + H281DRAFT_00851 0.73 -0.6 941,643 + H281DRAFT_00851 0.73 -0.3 941,643 + H281DRAFT_00851 0.73 -0.5 941,644 - H281DRAFT_00851 0.73 -0.8 941,644 - H281DRAFT_00851 0.73 -0.6 941,644 - H281DRAFT_00851 0.73 -3.3 941,644 - H281DRAFT_00851 0.73 -1.3 941,644 - H281DRAFT_00851 0.73 -2.2 941,644 - H281DRAFT_00851 0.73 -0.9 941,644 - H281DRAFT_00851 0.73 -0.4 941,663 + H281DRAFT_00851 0.74 -0.0 941,663 + H281DRAFT_00851 0.74 -0.7 941,663 + H281DRAFT_00851 0.74 +0.0 941,664 - H281DRAFT_00851 0.74 -0.3 941,668 - H281DRAFT_00851 0.75 -1.0 941,668 - H281DRAFT_00851 0.75 -1.4 941,668 - H281DRAFT_00851 0.75 -1.8 941,705 + H281DRAFT_00851 0.77 +0.1 941,706 - H281DRAFT_00851 0.77 +0.6 941,758 - H281DRAFT_00851 0.80 -3.6 941,758 - H281DRAFT_00851 0.80 +2.2 941,758 - H281DRAFT_00851 0.80 -2.5 941,758 - H281DRAFT_00851 0.80 -2.9 941,778 - H281DRAFT_00851 0.81 -3.8 941,778 - H281DRAFT_00851 0.81 +0.4 941,799 + H281DRAFT_00851 0.82 -2.2 942,696 - H281DRAFT_00852 0.38 -1.4 942,696 - H281DRAFT_00852 0.38 -1.1 942,696 - H281DRAFT_00852 0.38 -1.3 942,696 - H281DRAFT_00852 0.38 -1.2 942,705 - H281DRAFT_00852 0.39 -0.6 943,076 + H281DRAFT_00852 0.71 -0.7 943,222 - H281DRAFT_00852 0.83 -1.5 943,222 - H281DRAFT_00852 0.83 -1.7 943,225 + H281DRAFT_00852 0.83 -0.4 943,225 + H281DRAFT_00852 0.83 +1.8 943,225 + +3.2 943,226 - H281DRAFT_00852 0.83 -0.5 943,226 - H281DRAFT_00852 0.83 -3.4 943,378 + -2.4 943,378 + +0.1 943,379 - -1.5 943,510 + +0.2 943,510 + +1.3 943,644 - -2.5 943,644 - -2.1 943,644 - -2.0 943,647 + +0.2 943,648 - -2.5 943,707 - H281DRAFT_00853 0.11 -1.5 943,707 - H281DRAFT_00853 0.11 -2.1
Or see this region's nucleotide sequence