Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00849 and H281DRAFT_00850 are separated by 518 nucleotides H281DRAFT_00850 and H281DRAFT_00851 are separated by 49 nucleotides H281DRAFT_00851 and H281DRAFT_00852 are separated by 125 nucleotides
H281DRAFT_00849: H281DRAFT_00849 - conserved hypothetical protein, at 938,760 to 939,620
_00849
H281DRAFT_00850: H281DRAFT_00850 - hypothetical protein, at 940,139 to 940,306
_00850
H281DRAFT_00851: H281DRAFT_00851 - polyhydroxyalkanoate synthase, at 940,356 to 942,116
_00851
H281DRAFT_00852: H281DRAFT_00852 - acetyl-CoA acetyltransferase, at 942,242 to 943,423
_00852
Position (kb) 940
941
942
943 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 939.537 kb on + strand at 939.537 kb on + strand at 939.543 kb on + strand at 939.544 kb on - strand at 939.662 kb on + strand at 939.663 kb on - strand at 939.663 kb on - strand at 939.663 kb on - strand at 939.727 kb on + strand at 939.728 kb on - strand at 939.735 kb on + strand at 939.736 kb on - strand at 939.736 kb on - strand at 939.736 kb on - strand at 939.736 kb on - strand at 939.764 kb on + strand at 939.765 kb on - strand at 939.839 kb on + strand at 939.840 kb on - strand at 939.840 kb on - strand at 939.849 kb on + strand at 939.850 kb on - strand at 939.925 kb on + strand at 939.925 kb on + strand at 939.939 kb on + strand at 940.030 kb on + strand at 940.127 kb on + strand at 940.128 kb on - strand at 940.502 kb on + strand at 940.502 kb on + strand at 940.502 kb on + strand at 940.503 kb on - strand at 940.503 kb on - strand at 940.554 kb on + strand, within H281DRAFT_00851 at 940.555 kb on - strand, within H281DRAFT_00851 at 940.692 kb on + strand, within H281DRAFT_00851 at 940.693 kb on - strand, within H281DRAFT_00851 at 941.016 kb on + strand, within H281DRAFT_00851 at 941.017 kb on - strand, within H281DRAFT_00851 at 941.017 kb on - strand, within H281DRAFT_00851 at 941.039 kb on - strand, within H281DRAFT_00851 at 941.039 kb on - strand, within H281DRAFT_00851 at 941.082 kb on + strand, within H281DRAFT_00851 at 941.083 kb on - strand, within H281DRAFT_00851 at 941.083 kb on - strand, within H281DRAFT_00851 at 941.083 kb on - strand, within H281DRAFT_00851 at 941.083 kb on - strand, within H281DRAFT_00851 at 941.083 kb on - strand, within H281DRAFT_00851 at 941.085 kb on + strand, within H281DRAFT_00851 at 941.085 kb on + strand, within H281DRAFT_00851 at 941.086 kb on - strand, within H281DRAFT_00851 at 941.169 kb on - strand, within H281DRAFT_00851 at 941.192 kb on + strand, within H281DRAFT_00851 at 941.193 kb on - strand, within H281DRAFT_00851 at 941.293 kb on + strand, within H281DRAFT_00851 at 941.405 kb on - strand, within H281DRAFT_00851 at 941.566 kb on - strand, within H281DRAFT_00851 at 941.605 kb on - strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.663 kb on + strand, within H281DRAFT_00851 at 941.663 kb on + strand, within H281DRAFT_00851 at 941.663 kb on + strand, within H281DRAFT_00851 at 941.664 kb on - strand, within H281DRAFT_00851 at 941.668 kb on - strand, within H281DRAFT_00851 at 941.668 kb on - strand, within H281DRAFT_00851 at 941.668 kb on - strand, within H281DRAFT_00851 at 941.705 kb on + strand, within H281DRAFT_00851 at 941.706 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.778 kb on - strand, within H281DRAFT_00851 at 941.778 kb on - strand, within H281DRAFT_00851 at 941.799 kb on + strand, within H281DRAFT_00851 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.705 kb on - strand, within H281DRAFT_00852 at 943.076 kb on + strand, within H281DRAFT_00852
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 939,537 + -0.1 939,537 + +0.6 939,543 + +0.5 939,544 - +1.3 939,662 + -0.1 939,663 - +0.2 939,663 - -2.8 939,663 - -0.6 939,727 + +0.8 939,728 - +0.4 939,735 + -0.3 939,736 - +3.2 939,736 - -0.1 939,736 - -0.1 939,736 - +0.4 939,764 + +0.1 939,765 - -0.9 939,839 + -0.8 939,840 - +1.0 939,840 - +1.2 939,849 + +0.0 939,850 - +0.5 939,925 + -0.3 939,925 + -0.2 939,939 + -1.2 940,030 + -0.0 940,127 + +0.8 940,128 - -4.4 940,502 + +0.2 940,502 + +0.0 940,502 + -0.4 940,503 - -0.2 940,503 - +0.4 940,554 + H281DRAFT_00851 0.11 -0.6 940,555 - H281DRAFT_00851 0.11 +0.0 940,692 + H281DRAFT_00851 0.19 +1.2 940,693 - H281DRAFT_00851 0.19 +0.8 941,016 + H281DRAFT_00851 0.37 +3.4 941,017 - H281DRAFT_00851 0.38 -1.9 941,017 - H281DRAFT_00851 0.38 -0.8 941,039 - H281DRAFT_00851 0.39 -0.3 941,039 - H281DRAFT_00851 0.39 -0.6 941,082 + H281DRAFT_00851 0.41 -3.9 941,083 - H281DRAFT_00851 0.41 -0.3 941,083 - H281DRAFT_00851 0.41 -1.5 941,083 - H281DRAFT_00851 0.41 -4.0 941,083 - H281DRAFT_00851 0.41 -2.5 941,083 - H281DRAFT_00851 0.41 +0.4 941,085 + H281DRAFT_00851 0.41 +1.1 941,085 + H281DRAFT_00851 0.41 -1.3 941,086 - H281DRAFT_00851 0.41 -2.0 941,169 - H281DRAFT_00851 0.46 -1.5 941,192 + H281DRAFT_00851 0.47 -0.2 941,193 - H281DRAFT_00851 0.48 -1.7 941,293 + H281DRAFT_00851 0.53 -2.5 941,405 - H281DRAFT_00851 0.60 -0.4 941,566 - H281DRAFT_00851 0.69 -1.4 941,605 - H281DRAFT_00851 0.71 -1.8 941,643 + H281DRAFT_00851 0.73 -0.0 941,643 + H281DRAFT_00851 0.73 -0.6 941,643 + H281DRAFT_00851 0.73 -0.3 941,643 + H281DRAFT_00851 0.73 -0.5 941,644 - H281DRAFT_00851 0.73 -0.8 941,644 - H281DRAFT_00851 0.73 -0.6 941,644 - H281DRAFT_00851 0.73 -3.3 941,644 - H281DRAFT_00851 0.73 -1.3 941,644 - H281DRAFT_00851 0.73 -2.2 941,644 - H281DRAFT_00851 0.73 -0.9 941,644 - H281DRAFT_00851 0.73 -0.4 941,663 + H281DRAFT_00851 0.74 -0.0 941,663 + H281DRAFT_00851 0.74 -0.7 941,663 + H281DRAFT_00851 0.74 +0.0 941,664 - H281DRAFT_00851 0.74 -0.3 941,668 - H281DRAFT_00851 0.75 -1.0 941,668 - H281DRAFT_00851 0.75 -1.4 941,668 - H281DRAFT_00851 0.75 -1.8 941,705 + H281DRAFT_00851 0.77 +0.1 941,706 - H281DRAFT_00851 0.77 +0.6 941,758 - H281DRAFT_00851 0.80 -3.6 941,758 - H281DRAFT_00851 0.80 +2.2 941,758 - H281DRAFT_00851 0.80 -2.5 941,758 - H281DRAFT_00851 0.80 -2.9 941,778 - H281DRAFT_00851 0.81 -3.8 941,778 - H281DRAFT_00851 0.81 +0.4 941,799 + H281DRAFT_00851 0.82 -2.2 942,696 - H281DRAFT_00852 0.38 -1.4 942,696 - H281DRAFT_00852 0.38 -1.1 942,696 - H281DRAFT_00852 0.38 -1.3 942,696 - H281DRAFT_00852 0.38 -1.2 942,705 - H281DRAFT_00852 0.39 -0.6 943,076 + H281DRAFT_00852 0.71 -0.7
Or see this region's nucleotide sequence