Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00848 and H281DRAFT_00849 overlap by 4 nucleotides H281DRAFT_00849 and H281DRAFT_00850 are separated by 518 nucleotides H281DRAFT_00850 and H281DRAFT_00851 are separated by 49 nucleotides
H281DRAFT_00848: H281DRAFT_00848 - ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-), at 937,486 to 938,763
_00848
H281DRAFT_00849: H281DRAFT_00849 - conserved hypothetical protein, at 938,760 to 939,620
_00849
H281DRAFT_00850: H281DRAFT_00850 - hypothetical protein, at 940,139 to 940,306
_00850
H281DRAFT_00851: H281DRAFT_00851 - polyhydroxyalkanoate synthase, at 940,356 to 942,116
_00851
Position (kb)
938
939
940 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 938.440 kb on + strand, within H281DRAFT_00848 at 938.441 kb on - strand, within H281DRAFT_00848 at 938.644 kb on + strand at 938.644 kb on + strand at 938.645 kb on - strand at 938.645 kb on - strand at 938.647 kb on + strand at 938.647 kb on + strand at 938.648 kb on - strand at 938.983 kb on + strand, within H281DRAFT_00849 at 938.984 kb on - strand, within H281DRAFT_00849 at 939.294 kb on + strand, within H281DRAFT_00849 at 939.295 kb on - strand, within H281DRAFT_00849 at 939.331 kb on + strand, within H281DRAFT_00849 at 939.537 kb on + strand at 939.537 kb on + strand at 939.543 kb on + strand at 939.544 kb on - strand at 939.662 kb on + strand at 939.663 kb on - strand at 939.663 kb on - strand at 939.663 kb on - strand at 939.727 kb on + strand at 939.728 kb on - strand at 939.735 kb on + strand at 939.736 kb on - strand at 939.736 kb on - strand at 939.736 kb on - strand at 939.736 kb on - strand at 939.764 kb on + strand at 939.765 kb on - strand at 939.839 kb on + strand at 939.840 kb on - strand at 939.840 kb on - strand at 939.849 kb on + strand at 939.850 kb on - strand at 939.925 kb on + strand at 939.925 kb on + strand at 939.939 kb on + strand at 940.030 kb on + strand at 940.127 kb on + strand at 940.128 kb on - strand at 940.502 kb on + strand at 940.502 kb on + strand at 940.502 kb on + strand at 940.503 kb on - strand at 940.503 kb on - strand at 940.554 kb on + strand, within H281DRAFT_00851 at 940.555 kb on - strand, within H281DRAFT_00851
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 938,440 + H281DRAFT_00848 0.75 -0.1 938,441 - H281DRAFT_00848 0.75 -0.4 938,644 + -1.1 938,644 + +0.6 938,645 - -0.1 938,645 - -0.7 938,647 + +0.1 938,647 + +0.6 938,648 - -0.1 938,983 + H281DRAFT_00849 0.26 -0.3 938,984 - H281DRAFT_00849 0.26 +0.3 939,294 + H281DRAFT_00849 0.62 +0.7 939,295 - H281DRAFT_00849 0.62 -0.3 939,331 + H281DRAFT_00849 0.66 -0.0 939,537 + -0.1 939,537 + +0.6 939,543 + +0.5 939,544 - +1.3 939,662 + -0.1 939,663 - +0.2 939,663 - -2.8 939,663 - -0.6 939,727 + +0.8 939,728 - +0.4 939,735 + -0.3 939,736 - +3.2 939,736 - -0.1 939,736 - -0.1 939,736 - +0.4 939,764 + +0.1 939,765 - -0.9 939,839 + -0.8 939,840 - +1.0 939,840 - +1.2 939,849 + +0.0 939,850 - +0.5 939,925 + -0.3 939,925 + -0.2 939,939 + -1.2 940,030 + -0.0 940,127 + +0.8 940,128 - -4.4 940,502 + +0.2 940,502 + +0.0 940,502 + -0.4 940,503 - -0.2 940,503 - +0.4 940,554 + H281DRAFT_00851 0.11 -0.6 940,555 - H281DRAFT_00851 0.11 +0.0
Or see this region's nucleotide sequence