Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00839 and H281DRAFT_00840 are separated by 209 nucleotides H281DRAFT_00840 and H281DRAFT_00841 overlap by 86 nucleotides H281DRAFT_00841 and H281DRAFT_00842 are separated by 31 nucleotides H281DRAFT_00842 and H281DRAFT_00843 are separated by 5 nucleotides
H281DRAFT_00839: H281DRAFT_00839 - NADPH2:quinone reductase, at 929,027 to 930,001
_00839
H281DRAFT_00840: H281DRAFT_00840 - 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase, at 930,211 to 930,969
_00840
H281DRAFT_00841: H281DRAFT_00841 - hypothetical protein, at 930,884 to 931,456
_00841
H281DRAFT_00842: H281DRAFT_00842 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 931,488 to 932,102
_00842
H281DRAFT_00843: H281DRAFT_00843 - lipoprotein NlpD, at 932,108 to 933,055
_00843
Position (kb) 930
931
932 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 929.952 kb on - strand at 929.952 kb on - strand at 929.977 kb on - strand at 930.043 kb on - strand at 930.061 kb on + strand at 930.062 kb on - strand at 930.067 kb on + strand at 930.068 kb on - strand at 930.068 kb on - strand at 930.200 kb on - strand at 930.221 kb on + strand at 930.222 kb on - strand at 930.242 kb on - strand at 930.242 kb on - strand at 930.269 kb on - strand at 930.392 kb on - strand, within H281DRAFT_00840 at 930.392 kb on - strand, within H281DRAFT_00840 at 930.394 kb on + strand, within H281DRAFT_00840 at 930.395 kb on - strand, within H281DRAFT_00840 at 930.514 kb on + strand, within H281DRAFT_00840 at 930.514 kb on + strand, within H281DRAFT_00840 at 930.514 kb on - strand, within H281DRAFT_00840 at 930.515 kb on - strand at 930.646 kb on + strand, within H281DRAFT_00840 at 930.729 kb on + strand, within H281DRAFT_00840 at 930.730 kb on - strand, within H281DRAFT_00840 at 930.780 kb on + strand, within H281DRAFT_00840 at 930.803 kb on - strand, within H281DRAFT_00840 at 930.803 kb on - strand, within H281DRAFT_00840 at 930.838 kb on - strand, within H281DRAFT_00840 at 931.054 kb on + strand, within H281DRAFT_00841 at 931.054 kb on + strand, within H281DRAFT_00841 at 931.634 kb on + strand, within H281DRAFT_00842 at 931.634 kb on + strand, within H281DRAFT_00842 at 931.767 kb on + strand, within H281DRAFT_00842 at 931.768 kb on - strand, within H281DRAFT_00842 at 931.768 kb on - strand, within H281DRAFT_00842 at 931.851 kb on + strand at 931.852 kb on - strand, within H281DRAFT_00842 at 931.939 kb on + strand, within H281DRAFT_00842 at 931.940 kb on - strand, within H281DRAFT_00842 at 931.940 kb on - strand, within H281DRAFT_00842 at 932.008 kb on + strand, within H281DRAFT_00842 at 932.113 kb on + strand at 932.113 kb on + strand at 932.113 kb on + strand at 932.114 kb on - strand at 932.153 kb on - strand at 932.153 kb on - strand at 932.153 kb on - strand at 932.153 kb on - strand at 932.322 kb on - strand, within H281DRAFT_00843 at 932.381 kb on + strand, within H281DRAFT_00843 at 932.381 kb on + strand, within H281DRAFT_00843
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 929,952 - +1.6 929,952 - +0.7 929,977 - -0.0 930,043 - +1.2 930,061 + -2.3 930,062 - -1.3 930,067 + -0.2 930,068 - -1.2 930,068 - +1.9 930,200 - -0.7 930,221 + +1.2 930,222 - -1.6 930,242 - -1.6 930,242 - -0.7 930,269 - -2.8 930,392 - H281DRAFT_00840 0.24 -0.8 930,392 - H281DRAFT_00840 0.24 -0.9 930,394 + H281DRAFT_00840 0.24 -0.3 930,395 - H281DRAFT_00840 0.24 -2.0 930,514 + H281DRAFT_00840 0.40 -2.3 930,514 + H281DRAFT_00840 0.40 -0.9 930,514 - H281DRAFT_00840 0.40 -0.8 930,515 - -0.9 930,646 + H281DRAFT_00840 0.57 -0.7 930,729 + H281DRAFT_00840 0.68 -2.0 930,730 - H281DRAFT_00840 0.68 -0.9 930,780 + H281DRAFT_00840 0.75 -0.8 930,803 - H281DRAFT_00840 0.78 +0.2 930,803 - H281DRAFT_00840 0.78 -2.2 930,838 - H281DRAFT_00840 0.83 -1.1 931,054 + H281DRAFT_00841 0.30 -3.2 931,054 + H281DRAFT_00841 0.30 -1.1 931,634 + H281DRAFT_00842 0.24 -1.1 931,634 + H281DRAFT_00842 0.24 -3.9 931,767 + H281DRAFT_00842 0.45 +0.2 931,768 - H281DRAFT_00842 0.46 -1.9 931,768 - H281DRAFT_00842 0.46 +2.8 931,851 + -0.9 931,852 - H281DRAFT_00842 0.59 +0.7 931,939 + H281DRAFT_00842 0.73 -2.9 931,940 - H281DRAFT_00842 0.73 -1.3 931,940 - H281DRAFT_00842 0.73 -1.1 932,008 + H281DRAFT_00842 0.85 -2.2 932,113 + +1.9 932,113 + +0.1 932,113 + -1.0 932,114 - +0.5 932,153 - -0.4 932,153 - -1.4 932,153 - +0.5 932,153 - +1.4 932,322 - H281DRAFT_00843 0.23 +1.2 932,381 + H281DRAFT_00843 0.29 -0.2 932,381 + H281DRAFT_00843 0.29 +0.3
Or see this region's nucleotide sequence