Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00788 and H281DRAFT_00789 are separated by 382 nucleotides H281DRAFT_00789 and H281DRAFT_00790 are separated by 50 nucleotides H281DRAFT_00790 and H281DRAFT_00791 are separated by 2 nucleotides H281DRAFT_00791 and H281DRAFT_00792 are separated by 27 nucleotides
H281DRAFT_00788: H281DRAFT_00788 - transcriptional regulator, LysR family, at 875,687 to 876,601
_00788
H281DRAFT_00789: H281DRAFT_00789 - SSU ribosomal protein S6P, at 876,984 to 877,358
_00789
H281DRAFT_00790: H281DRAFT_00790 - restart primosome assembly protein PriB, at 877,409 to 877,708
_00790
H281DRAFT_00791: H281DRAFT_00791 - SSU ribosomal protein S18P, at 877,711 to 877,986
_00791
H281DRAFT_00792: H281DRAFT_00792 - LSU ribosomal protein L9P, at 878,014 to 878,466
_00792
Position (kb) 876
877
878 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 876.101 kb on + strand, within H281DRAFT_00788 at 876.101 kb on + strand, within H281DRAFT_00788 at 876.101 kb on + strand, within H281DRAFT_00788 at 876.102 kb on - strand, within H281DRAFT_00788 at 876.114 kb on + strand, within H281DRAFT_00788 at 876.197 kb on + strand, within H281DRAFT_00788 at 876.363 kb on + strand, within H281DRAFT_00788 at 876.363 kb on + strand, within H281DRAFT_00788 at 876.483 kb on - strand, within H281DRAFT_00788 at 876.515 kb on + strand at 876.515 kb on + strand at 876.515 kb on + strand at 876.516 kb on - strand at 876.516 kb on - strand at 876.549 kb on - strand at 876.563 kb on + strand at 876.563 kb on + strand at 876.578 kb on + strand at 876.579 kb on - strand at 876.596 kb on + strand at 876.597 kb on - strand at 876.599 kb on + strand at 876.600 kb on - strand at 876.600 kb on - strand at 876.600 kb on - strand at 876.722 kb on + strand at 876.722 kb on + strand at 876.723 kb on - strand at 876.832 kb on + strand at 876.832 kb on + strand at 876.832 kb on + strand at 876.832 kb on + strand at 876.833 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 876,101 + H281DRAFT_00788 0.45 -2.2 876,101 + H281DRAFT_00788 0.45 +1.0 876,101 + H281DRAFT_00788 0.45 -0.1 876,102 - H281DRAFT_00788 0.45 -1.4 876,114 + H281DRAFT_00788 0.47 -0.1 876,197 + H281DRAFT_00788 0.56 -1.1 876,363 + H281DRAFT_00788 0.74 -1.5 876,363 + H281DRAFT_00788 0.74 -1.2 876,483 - H281DRAFT_00788 0.87 -1.1 876,515 + -0.2 876,515 + +1.1 876,515 + -0.7 876,516 - -1.0 876,516 - -1.2 876,549 - -2.4 876,563 + -2.0 876,563 + -0.8 876,578 + -1.2 876,579 - -1.7 876,596 + +0.2 876,597 - -0.7 876,599 + -0.0 876,600 - +1.0 876,600 - -0.6 876,600 - +0.4 876,722 + +1.0 876,722 + -2.8 876,723 - +1.5 876,832 + -1.1 876,832 + -0.1 876,832 + +1.9 876,832 + -0.2 876,833 - +0.5
Or see this region's nucleotide sequence