Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00784 and H281DRAFT_00785 are separated by 558 nucleotides H281DRAFT_00785 and H281DRAFT_00786 are separated by 105 nucleotides
H281DRAFT_00784: H281DRAFT_00784 - Nucleoid-associated protein YgaU, contains BON and LysM domains, at 870,783 to 871,277
_00784
H281DRAFT_00785: H281DRAFT_00785 - 2-hydroxy-3-oxopropionate reductase, at 871,836 to 872,744
_00785
H281DRAFT_00786: H281DRAFT_00786 - hydroxypyruvate isomerase, at 872,850 to 873,659
_00786
Position (kb) 871
872
873 Strain fitness (log2 ratio) -2
-1
0
1 at 870.892 kb on + strand, within H281DRAFT_00784 at 870.892 kb on + strand, within H281DRAFT_00784 at 870.893 kb on - strand, within H281DRAFT_00784 at 870.969 kb on + strand, within H281DRAFT_00784 at 871.094 kb on - strand, within H281DRAFT_00784 at 871.094 kb on - strand, within H281DRAFT_00784 at 871.121 kb on + strand, within H281DRAFT_00784 at 871.138 kb on + strand, within H281DRAFT_00784 at 871.139 kb on - strand, within H281DRAFT_00784 at 871.272 kb on - strand at 871.299 kb on + strand at 871.418 kb on + strand at 871.426 kb on - strand at 871.767 kb on - strand at 871.951 kb on - strand, within H281DRAFT_00785 at 871.992 kb on + strand, within H281DRAFT_00785 at 872.280 kb on - strand, within H281DRAFT_00785 at 872.280 kb on - strand, within H281DRAFT_00785 at 872.939 kb on - strand, within H281DRAFT_00786 at 872.962 kb on + strand, within H281DRAFT_00786 at 873.130 kb on + strand, within H281DRAFT_00786 at 873.217 kb on + strand, within H281DRAFT_00786 at 873.237 kb on + strand, within H281DRAFT_00786 at 873.238 kb on - strand, within H281DRAFT_00786
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 870,892 + H281DRAFT_00784 0.22 +0.4 870,892 + H281DRAFT_00784 0.22 +0.3 870,893 - H281DRAFT_00784 0.22 -0.3 870,969 + H281DRAFT_00784 0.38 +0.6 871,094 - H281DRAFT_00784 0.63 +0.0 871,094 - H281DRAFT_00784 0.63 -1.0 871,121 + H281DRAFT_00784 0.68 -0.5 871,138 + H281DRAFT_00784 0.72 +0.4 871,139 - H281DRAFT_00784 0.72 -1.5 871,272 - -0.2 871,299 + +0.2 871,418 + -0.1 871,426 - -2.1 871,767 - +0.0 871,951 - H281DRAFT_00785 0.13 -0.5 871,992 + H281DRAFT_00785 0.17 -1.0 872,280 - H281DRAFT_00785 0.49 -1.5 872,280 - H281DRAFT_00785 0.49 -1.1 872,939 - H281DRAFT_00786 0.11 -0.2 872,962 + H281DRAFT_00786 0.14 -1.5 873,130 + H281DRAFT_00786 0.35 -1.7 873,217 + H281DRAFT_00786 0.45 -1.4 873,237 + H281DRAFT_00786 0.48 -1.8 873,238 - H281DRAFT_00786 0.48 -1.7
Or see this region's nucleotide sequence