Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00782 and H281DRAFT_00783 are separated by 22 nucleotides H281DRAFT_00783 and H281DRAFT_00784 are separated by 125 nucleotides
H281DRAFT_00782: H281DRAFT_00782 - transcriptional regulator, LysR family, at 868,623 to 869,549
_00782
H281DRAFT_00783: H281DRAFT_00783 - L-asparaginase, at 869,572 to 870,657
_00783
H281DRAFT_00784: H281DRAFT_00784 - Nucleoid-associated protein YgaU, contains BON and LysM domains, at 870,783 to 871,277
_00784
Position (kb) 869
870
871 Strain fitness (log2 ratio) -2
-1
0
1
2 at 868.701 kb on + strand at 869.212 kb on - strand, within H281DRAFT_00782 at 869.319 kb on + strand, within H281DRAFT_00782 at 869.319 kb on + strand, within H281DRAFT_00782 at 869.320 kb on - strand, within H281DRAFT_00782 at 869.320 kb on - strand, within H281DRAFT_00782 at 869.365 kb on - strand, within H281DRAFT_00782 at 869.889 kb on + strand, within H281DRAFT_00783 at 869.890 kb on - strand, within H281DRAFT_00783 at 870.175 kb on + strand, within H281DRAFT_00783 at 870.175 kb on + strand, within H281DRAFT_00783 at 870.474 kb on - strand, within H281DRAFT_00783 at 870.506 kb on + strand, within H281DRAFT_00783 at 870.507 kb on - strand, within H281DRAFT_00783 at 870.652 kb on + strand at 870.652 kb on + strand at 870.653 kb on - strand at 870.653 kb on - strand at 870.782 kb on - strand at 870.782 kb on - strand at 870.782 kb on - strand at 870.817 kb on + strand at 870.817 kb on + strand at 870.818 kb on - strand at 870.892 kb on + strand, within H281DRAFT_00784 at 870.892 kb on + strand, within H281DRAFT_00784 at 870.893 kb on - strand, within H281DRAFT_00784 at 870.969 kb on + strand, within H281DRAFT_00784 at 871.094 kb on - strand, within H281DRAFT_00784 at 871.094 kb on - strand, within H281DRAFT_00784 at 871.121 kb on + strand, within H281DRAFT_00784 at 871.138 kb on + strand, within H281DRAFT_00784 at 871.139 kb on - strand, within H281DRAFT_00784 at 871.272 kb on - strand at 871.299 kb on + strand at 871.418 kb on + strand at 871.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 868,701 + -0.3 869,212 - H281DRAFT_00782 0.64 -2.7 869,319 + H281DRAFT_00782 0.75 +0.2 869,319 + H281DRAFT_00782 0.75 +0.3 869,320 - H281DRAFT_00782 0.75 +1.1 869,320 - H281DRAFT_00782 0.75 +0.9 869,365 - H281DRAFT_00782 0.80 +2.4 869,889 + H281DRAFT_00783 0.29 +0.6 869,890 - H281DRAFT_00783 0.29 +0.6 870,175 + H281DRAFT_00783 0.56 +1.7 870,175 + H281DRAFT_00783 0.56 -0.6 870,474 - H281DRAFT_00783 0.83 +0.1 870,506 + H281DRAFT_00783 0.86 -0.7 870,507 - H281DRAFT_00783 0.86 +1.1 870,652 + +0.1 870,652 + +0.8 870,653 - -0.6 870,653 - +0.1 870,782 - +0.1 870,782 - +0.6 870,782 - +0.0 870,817 + +0.1 870,817 + -0.2 870,818 - +0.5 870,892 + H281DRAFT_00784 0.22 +0.4 870,892 + H281DRAFT_00784 0.22 +0.3 870,893 - H281DRAFT_00784 0.22 -0.3 870,969 + H281DRAFT_00784 0.38 +0.6 871,094 - H281DRAFT_00784 0.63 +0.0 871,094 - H281DRAFT_00784 0.63 -1.0 871,121 + H281DRAFT_00784 0.68 -0.5 871,138 + H281DRAFT_00784 0.72 +0.4 871,139 - H281DRAFT_00784 0.72 -1.5 871,272 - -0.2 871,299 + +0.2 871,418 + -0.1 871,426 - -2.1
Or see this region's nucleotide sequence