Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00781

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00780 and H281DRAFT_00781 overlap by 1 nucleotidesH281DRAFT_00781 and H281DRAFT_00782 are separated by 79 nucleotides H281DRAFT_00780: H281DRAFT_00780 - sulfate transport system permease protein, at 866,451 to 867,485 _00780 H281DRAFT_00781: H281DRAFT_00781 - sulfate transport system ATP-binding protein, at 867,485 to 868,543 _00781 H281DRAFT_00782: H281DRAFT_00782 - transcriptional regulator, LysR family, at 868,623 to 869,549 _00782 Position (kb) 867 868 869Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 866.732 kb on + strand, within H281DRAFT_00780at 866.876 kb on + strand, within H281DRAFT_00780at 866.877 kb on - strand, within H281DRAFT_00780at 866.877 kb on - strand, within H281DRAFT_00780at 866.880 kb on + strand, within H281DRAFT_00780at 866.881 kb on - strand, within H281DRAFT_00780at 866.881 kb on - strand, within H281DRAFT_00780at 866.933 kb on + strand, within H281DRAFT_00780at 867.256 kb on - strand, within H281DRAFT_00780at 867.344 kb on + strand, within H281DRAFT_00780at 867.498 kb on + strandat 867.499 kb on - strandat 867.502 kb on + strandat 867.748 kb on + strand, within H281DRAFT_00781at 867.916 kb on + strand, within H281DRAFT_00781at 868.274 kb on - strand, within H281DRAFT_00781at 868.304 kb on + strand, within H281DRAFT_00781at 868.304 kb on + strand, within H281DRAFT_00781at 868.308 kb on + strand, within H281DRAFT_00781at 868.308 kb on + strand, within H281DRAFT_00781at 868.309 kb on - strand, within H281DRAFT_00781at 868.309 kb on - strand, within H281DRAFT_00781at 868.361 kb on - strand, within H281DRAFT_00781at 868.701 kb on + strandat 869.212 kb on - strand, within H281DRAFT_00782at 869.319 kb on + strand, within H281DRAFT_00782at 869.319 kb on + strand, within H281DRAFT_00782at 869.320 kb on - strand, within H281DRAFT_00782at 869.320 kb on - strand, within H281DRAFT_00782at 869.365 kb on - strand, within H281DRAFT_00782

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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866,732 + H281DRAFT_00780 0.27 +0.1
866,876 + H281DRAFT_00780 0.41 +2.0
866,877 - H281DRAFT_00780 0.41 -0.1
866,877 - H281DRAFT_00780 0.41 +0.7
866,880 + H281DRAFT_00780 0.41 -0.3
866,881 - H281DRAFT_00780 0.42 -0.0
866,881 - H281DRAFT_00780 0.42 -0.2
866,933 + H281DRAFT_00780 0.47 +1.5
867,256 - H281DRAFT_00780 0.78 +1.4
867,344 + H281DRAFT_00780 0.86 -0.9
867,498 + +0.0
867,499 - +0.6
867,502 + +1.2
867,748 + H281DRAFT_00781 0.25 -0.2
867,916 + H281DRAFT_00781 0.41 +0.3
868,274 - H281DRAFT_00781 0.75 +0.5
868,304 + H281DRAFT_00781 0.77 -0.6
868,304 + H281DRAFT_00781 0.77 +0.4
868,308 + H281DRAFT_00781 0.78 -0.2
868,308 + H281DRAFT_00781 0.78 -1.7
868,309 - H281DRAFT_00781 0.78 -3.4
868,309 - H281DRAFT_00781 0.78 -0.7
868,361 - H281DRAFT_00781 0.83 +0.4
868,701 + -0.3
869,212 - H281DRAFT_00782 0.64 -2.7
869,319 + H281DRAFT_00782 0.75 +0.2
869,319 + H281DRAFT_00782 0.75 +0.3
869,320 - H281DRAFT_00782 0.75 +1.1
869,320 - H281DRAFT_00782 0.75 +0.9
869,365 - H281DRAFT_00782 0.80 +2.4

Or see this region's nucleotide sequence