Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00687 and H281DRAFT_00688 are separated by 171 nucleotides H281DRAFT_00688 and H281DRAFT_00689 are separated by 216 nucleotides
H281DRAFT_00687: H281DRAFT_00687 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 769,135 to 769,575
_00687
H281DRAFT_00688: H281DRAFT_00688 - Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family, at 769,747 to 771,585
_00688
H281DRAFT_00689: H281DRAFT_00689 - transcriptional regulator, AraC family, at 771,802 to 772,686
_00689
Position (kb) 769
770
771
772 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 768.832 kb on + strand at 768.832 kb on + strand at 768.908 kb on - strand at 769.065 kb on + strand at 769.179 kb on + strand, within H281DRAFT_00687 at 769.349 kb on - strand at 769.590 kb on - strand at 769.590 kb on - strand at 769.704 kb on + strand at 769.705 kb on - strand at 769.705 kb on - strand at 769.709 kb on + strand at 769.918 kb on + strand at 769.968 kb on - strand, within H281DRAFT_00688 at 770.297 kb on - strand, within H281DRAFT_00688 at 770.310 kb on + strand, within H281DRAFT_00688 at 770.408 kb on + strand, within H281DRAFT_00688 at 770.471 kb on + strand, within H281DRAFT_00688 at 770.501 kb on + strand, within H281DRAFT_00688 at 770.615 kb on + strand, within H281DRAFT_00688 at 770.615 kb on + strand, within H281DRAFT_00688 at 770.616 kb on - strand, within H281DRAFT_00688 at 770.720 kb on + strand, within H281DRAFT_00688 at 770.846 kb on - strand at 771.749 kb on - strand at 772.508 kb on + strand, within H281DRAFT_00689
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 768,832 + -1.0 768,832 + +1.6 768,908 - +0.3 769,065 + -1.6 769,179 + H281DRAFT_00687 0.10 -0.3 769,349 - +0.1 769,590 - -0.4 769,590 - -0.3 769,704 + -1.7 769,705 - +0.3 769,705 - -0.1 769,709 + -0.3 769,918 + +0.1 769,968 - H281DRAFT_00688 0.12 -0.6 770,297 - H281DRAFT_00688 0.30 +1.2 770,310 + H281DRAFT_00688 0.31 -3.3 770,408 + H281DRAFT_00688 0.36 +0.7 770,471 + H281DRAFT_00688 0.39 -1.2 770,501 + H281DRAFT_00688 0.41 +0.1 770,615 + H281DRAFT_00688 0.47 +0.4 770,615 + H281DRAFT_00688 0.47 -1.3 770,616 - H281DRAFT_00688 0.47 -0.9 770,720 + H281DRAFT_00688 0.53 +0.6 770,846 - -0.9 771,749 - +0.7 772,508 + H281DRAFT_00689 0.80 +0.5
Or see this region's nucleotide sequence