Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00470 and H281DRAFT_00471 are separated by 96 nucleotides H281DRAFT_00471 and H281DRAFT_00472 are separated by 179 nucleotides H281DRAFT_00472 and H281DRAFT_00473 are separated by 10 nucleotides
H281DRAFT_00470: H281DRAFT_00470 - murein-DD-endopeptidase. Serine peptidase. MEROPS family S11, at 529,313 to 530,494
_00470
H281DRAFT_00471: H281DRAFT_00471 - transcriptional regulator, IclR family, at 530,591 to 531,403
_00471
H281DRAFT_00472: H281DRAFT_00472 - L-lactate dehydrogenase complex protein LldE, at 531,583 to 532,305
_00472
H281DRAFT_00473: H281DRAFT_00473 - iron-sulfur cluster-binding protein, at 532,316 to 533,731
_00473
Position (kb) 530
531
532 Strain fitness (log2 ratio) -2
-1
0
1
2 at 529.610 kb on + strand, within H281DRAFT_00470 at 529.610 kb on + strand, within H281DRAFT_00470 at 529.610 kb on + strand, within H281DRAFT_00470 at 529.610 kb on + strand, within H281DRAFT_00470 at 529.611 kb on - strand, within H281DRAFT_00470 at 529.611 kb on - strand, within H281DRAFT_00470 at 529.612 kb on + strand, within H281DRAFT_00470 at 529.612 kb on + strand, within H281DRAFT_00470 at 529.612 kb on + strand, within H281DRAFT_00470 at 529.613 kb on - strand, within H281DRAFT_00470 at 529.655 kb on + strand, within H281DRAFT_00470 at 529.655 kb on + strand, within H281DRAFT_00470 at 529.656 kb on - strand, within H281DRAFT_00470 at 529.740 kb on - strand, within H281DRAFT_00470 at 530.165 kb on + strand, within H281DRAFT_00470 at 530.165 kb on + strand, within H281DRAFT_00470 at 530.166 kb on - strand, within H281DRAFT_00470 at 530.207 kb on + strand, within H281DRAFT_00470 at 530.207 kb on + strand at 530.207 kb on + strand, within H281DRAFT_00470 at 530.208 kb on - strand, within H281DRAFT_00470 at 530.217 kb on - strand, within H281DRAFT_00470 at 530.240 kb on + strand, within H281DRAFT_00470 at 530.251 kb on + strand, within H281DRAFT_00470 at 530.251 kb on + strand, within H281DRAFT_00470 at 530.393 kb on + strand at 530.618 kb on - strand at 530.764 kb on - strand, within H281DRAFT_00471 at 530.764 kb on - strand, within H281DRAFT_00471 at 530.764 kb on - strand, within H281DRAFT_00471 at 530.764 kb on - strand, within H281DRAFT_00471 at 530.765 kb on + strand, within H281DRAFT_00471 at 530.766 kb on - strand, within H281DRAFT_00471 at 530.766 kb on - strand, within H281DRAFT_00471 at 530.766 kb on - strand, within H281DRAFT_00471 at 530.768 kb on - strand, within H281DRAFT_00471 at 531.320 kb on - strand, within H281DRAFT_00471 at 531.446 kb on - strand at 531.513 kb on - strand at 531.513 kb on - strand at 531.513 kb on - strand at 531.531 kb on + strand at 531.531 kb on + strand at 531.552 kb on + strand at 531.683 kb on + strand, within H281DRAFT_00472 at 531.684 kb on - strand, within H281DRAFT_00472 at 531.721 kb on + strand, within H281DRAFT_00472 at 531.722 kb on - strand, within H281DRAFT_00472 at 531.793 kb on + strand, within H281DRAFT_00472 at 531.793 kb on + strand, within H281DRAFT_00472 at 531.794 kb on - strand, within H281DRAFT_00472 at 531.983 kb on - strand, within H281DRAFT_00472 at 532.123 kb on + strand, within H281DRAFT_00472 at 532.200 kb on - strand, within H281DRAFT_00472 at 532.224 kb on + strand, within H281DRAFT_00472 at 532.304 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 529,610 + H281DRAFT_00470 0.25 +0.7 529,610 + H281DRAFT_00470 0.25 +0.8 529,610 + H281DRAFT_00470 0.25 +0.0 529,610 + H281DRAFT_00470 0.25 +0.1 529,611 - H281DRAFT_00470 0.25 -0.6 529,611 - H281DRAFT_00470 0.25 +2.0 529,612 + H281DRAFT_00470 0.25 +1.4 529,612 + H281DRAFT_00470 0.25 +0.3 529,612 + H281DRAFT_00470 0.25 +0.7 529,613 - H281DRAFT_00470 0.25 +0.0 529,655 + H281DRAFT_00470 0.29 -0.1 529,655 + H281DRAFT_00470 0.29 +1.9 529,656 - H281DRAFT_00470 0.29 -1.2 529,740 - H281DRAFT_00470 0.36 +1.4 530,165 + H281DRAFT_00470 0.72 +0.9 530,165 + H281DRAFT_00470 0.72 +1.1 530,166 - H281DRAFT_00470 0.72 +2.0 530,207 + H281DRAFT_00470 0.76 +0.1 530,207 + +2.0 530,207 + H281DRAFT_00470 0.76 +0.5 530,208 - H281DRAFT_00470 0.76 +0.3 530,217 - H281DRAFT_00470 0.76 +1.6 530,240 + H281DRAFT_00470 0.78 +1.3 530,251 + H281DRAFT_00470 0.79 +0.8 530,251 + H281DRAFT_00470 0.79 +1.3 530,393 + +0.2 530,618 - -0.2 530,764 - H281DRAFT_00471 0.21 -0.7 530,764 - H281DRAFT_00471 0.21 +0.4 530,764 - H281DRAFT_00471 0.21 +1.3 530,764 - H281DRAFT_00471 0.21 -1.3 530,765 + H281DRAFT_00471 0.21 -2.0 530,766 - H281DRAFT_00471 0.22 -1.0 530,766 - H281DRAFT_00471 0.22 -1.6 530,766 - H281DRAFT_00471 0.22 +1.5 530,768 - H281DRAFT_00471 0.22 -0.9 531,320 - H281DRAFT_00471 0.90 -2.1 531,446 - -1.0 531,513 - +0.7 531,513 - +0.4 531,513 - +0.2 531,531 + -2.3 531,531 + -0.4 531,552 + +0.1 531,683 + H281DRAFT_00472 0.14 -1.7 531,684 - H281DRAFT_00472 0.14 +0.2 531,721 + H281DRAFT_00472 0.19 -1.6 531,722 - H281DRAFT_00472 0.19 +0.5 531,793 + H281DRAFT_00472 0.29 +1.9 531,793 + H281DRAFT_00472 0.29 -0.5 531,794 - H281DRAFT_00472 0.29 -1.0 531,983 - H281DRAFT_00472 0.55 +1.0 532,123 + H281DRAFT_00472 0.75 -1.7 532,200 - H281DRAFT_00472 0.85 +0.4 532,224 + H281DRAFT_00472 0.89 +0.2 532,304 - -0.0
Or see this region's nucleotide sequence