Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00383 and H281DRAFT_00384 overlap by 1 nucleotides H281DRAFT_00384 and H281DRAFT_00385 are separated by 125 nucleotides H281DRAFT_00385 and H281DRAFT_00386 are separated by 302 nucleotides H281DRAFT_00386 and H281DRAFT_00387 are separated by 61 nucleotides
H281DRAFT_00383: H281DRAFT_00383 - amino acid ABC transporter membrane protein, PAAT family, at 423,590 to 424,267
_00383
H281DRAFT_00384: H281DRAFT_00384 - amino acid ABC transporter ATP-binding protein, PAAT family, at 424,267 to 425,034
_00384
H281DRAFT_00385: H281DRAFT_00385 - 2-isopropylmalate synthase, at 425,160 to 426,878
_00385
H281DRAFT_00386: H281DRAFT_00386 - hypothetical protein, at 427,181 to 427,687
_00386
H281DRAFT_00387: H281DRAFT_00387 - hypothetical protein, at 427,749 to 429,617
_00387
Position (kb) 425
426
427 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 424.179 kb on - strand, within H281DRAFT_00383 at 424.389 kb on + strand, within H281DRAFT_00384 at 424.754 kb on + strand, within H281DRAFT_00384 at 424.755 kb on - strand, within H281DRAFT_00384 at 424.755 kb on - strand, within H281DRAFT_00384 at 424.755 kb on - strand, within H281DRAFT_00384 at 424.761 kb on - strand, within H281DRAFT_00384 at 424.817 kb on + strand, within H281DRAFT_00384 at 424.912 kb on - strand, within H281DRAFT_00384 at 424.923 kb on - strand, within H281DRAFT_00384 at 425.060 kb on + strand at 425.128 kb on + strand at 425.129 kb on - strand at 425.150 kb on + strand at 425.162 kb on - strand at 425.398 kb on + strand, within H281DRAFT_00385 at 425.717 kb on - strand, within H281DRAFT_00385 at 425.768 kb on - strand, within H281DRAFT_00385 at 425.803 kb on + strand, within H281DRAFT_00385 at 425.804 kb on - strand, within H281DRAFT_00385 at 425.906 kb on - strand, within H281DRAFT_00385 at 426.214 kb on + strand, within H281DRAFT_00385 at 426.496 kb on + strand, within H281DRAFT_00385 at 426.497 kb on - strand, within H281DRAFT_00385 at 426.497 kb on - strand, within H281DRAFT_00385 at 426.853 kb on + strand at 426.861 kb on - strand at 426.909 kb on - strand at 426.971 kb on + strand at 427.050 kb on + strand at 427.050 kb on + strand at 427.051 kb on - strand at 427.051 kb on - strand at 427.100 kb on + strand at 427.101 kb on - strand at 427.316 kb on - strand, within H281DRAFT_00386 at 427.621 kb on + strand, within H281DRAFT_00386 at 427.621 kb on + strand at 427.750 kb on + strand at 427.750 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 424,179 - H281DRAFT_00383 0.87 +0.0 424,389 + H281DRAFT_00384 0.16 +3.5 424,754 + H281DRAFT_00384 0.63 -1.8 424,755 - H281DRAFT_00384 0.64 -1.2 424,755 - H281DRAFT_00384 0.64 +0.2 424,755 - H281DRAFT_00384 0.64 +1.0 424,761 - H281DRAFT_00384 0.64 +1.1 424,817 + H281DRAFT_00384 0.72 +0.5 424,912 - H281DRAFT_00384 0.84 +2.1 424,923 - H281DRAFT_00384 0.85 +0.3 425,060 + +0.9 425,128 + +0.0 425,129 - +0.0 425,150 + -0.2 425,162 - +0.8 425,398 + H281DRAFT_00385 0.14 -0.4 425,717 - H281DRAFT_00385 0.32 +0.1 425,768 - H281DRAFT_00385 0.35 +0.8 425,803 + H281DRAFT_00385 0.37 +0.1 425,804 - H281DRAFT_00385 0.37 -0.2 425,906 - H281DRAFT_00385 0.43 +0.0 426,214 + H281DRAFT_00385 0.61 -0.4 426,496 + H281DRAFT_00385 0.78 -1.7 426,497 - H281DRAFT_00385 0.78 -0.7 426,497 - H281DRAFT_00385 0.78 -1.2 426,853 + -0.3 426,861 - -0.1 426,909 - -1.0 426,971 + +0.8 427,050 + +0.3 427,050 + -0.6 427,051 - -0.3 427,051 - -0.6 427,100 + -1.1 427,101 - -0.1 427,316 - H281DRAFT_00386 0.27 +1.0 427,621 + H281DRAFT_00386 0.87 -2.8 427,621 + +0.8 427,750 + -2.7 427,750 + +0.3
Or see this region's nucleotide sequence