Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00381 and H281DRAFT_00382 are separated by 350 nucleotides H281DRAFT_00382 and H281DRAFT_00383 are separated by 22 nucleotides H281DRAFT_00383 and H281DRAFT_00384 overlap by 1 nucleotides
H281DRAFT_00381: H281DRAFT_00381 - dihydropyrimidinase, at 420,983 to 422,434
_00381
H281DRAFT_00382: H281DRAFT_00382 - amino acid ABC transporter substrate-binding protein, PAAT family, at 422,785 to 423,567
_00382
H281DRAFT_00383: H281DRAFT_00383 - amino acid ABC transporter membrane protein, PAAT family, at 423,590 to 424,267
_00383
H281DRAFT_00384: H281DRAFT_00384 - amino acid ABC transporter ATP-binding protein, PAAT family, at 424,267 to 425,034
_00384
Position (kb) 422
423
424 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 421.817 kb on + strand, within H281DRAFT_00381 at 422.282 kb on - strand, within H281DRAFT_00381 at 422.593 kb on - strand at 422.613 kb on - strand at 422.914 kb on + strand, within H281DRAFT_00382 at 422.915 kb on - strand, within H281DRAFT_00382 at 422.915 kb on - strand, within H281DRAFT_00382 at 423.541 kb on + strand at 423.541 kb on + strand at 423.636 kb on + strand at 423.639 kb on - strand at 423.639 kb on - strand at 423.764 kb on + strand, within H281DRAFT_00383 at 423.897 kb on - strand, within H281DRAFT_00383 at 424.158 kb on - strand, within H281DRAFT_00383 at 424.179 kb on - strand, within H281DRAFT_00383 at 424.389 kb on + strand, within H281DRAFT_00384
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 421,817 + H281DRAFT_00381 0.57 +0.2 422,282 - H281DRAFT_00381 0.89 -0.8 422,593 - -1.0 422,613 - -0.2 422,914 + H281DRAFT_00382 0.16 -0.4 422,915 - H281DRAFT_00382 0.17 +0.6 422,915 - H281DRAFT_00382 0.17 -0.7 423,541 + -1.6 423,541 + -1.1 423,636 + +0.4 423,639 - +1.0 423,639 - -1.1 423,764 + H281DRAFT_00383 0.26 -0.7 423,897 - H281DRAFT_00383 0.45 +0.4 424,158 - H281DRAFT_00383 0.84 -1.8 424,179 - H281DRAFT_00383 0.87 +0.0 424,389 + H281DRAFT_00384 0.16 +3.5
Or see this region's nucleotide sequence