Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00351 and H281DRAFT_00352 are separated by 375 nucleotides H281DRAFT_00352 and H281DRAFT_00353 overlap by 28 nucleotides H281DRAFT_00353 and H281DRAFT_00354 are separated by 80 nucleotides
H281DRAFT_00351: H281DRAFT_00351 - Heme-degrading monooxygenase HmoA, at 384,241 to 384,915
_00351
H281DRAFT_00352: H281DRAFT_00352 - transcriptional regulator, LysR family, at 385,291 to 386,211
_00352
H281DRAFT_00353: H281DRAFT_00353 - G/U mismatch-specific uracil-DNA glycosylase, at 386,184 to 386,630
_00353
H281DRAFT_00354: H281DRAFT_00354 - transcriptional regulator, AraC family with amidase-like domain, at 386,711 to 387,736
_00354
Position (kb) 385
386
387 Strain fitness (log2 ratio) -1
0
1 at 384.892 kb on + strand at 385.133 kb on + strand at 385.134 kb on - strand at 385.137 kb on + strand at 385.515 kb on + strand, within H281DRAFT_00352 at 385.801 kb on + strand, within H281DRAFT_00352 at 386.246 kb on + strand, within H281DRAFT_00353 at 386.383 kb on + strand, within H281DRAFT_00353 at 386.436 kb on + strand, within H281DRAFT_00353 at 386.641 kb on - strand at 386.674 kb on - strand at 386.718 kb on + strand at 386.758 kb on + strand at 386.932 kb on + strand, within H281DRAFT_00354 at 387.060 kb on - strand, within H281DRAFT_00354 at 387.075 kb on + strand, within H281DRAFT_00354 at 387.165 kb on + strand, within H281DRAFT_00354 at 387.165 kb on + strand, within H281DRAFT_00354 at 387.165 kb on + strand, within H281DRAFT_00354 at 387.168 kb on - strand, within H281DRAFT_00354 at 387.168 kb on - strand, within H281DRAFT_00354
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 384,892 + -0.9 385,133 + +0.2 385,134 - +0.7 385,137 + +0.1 385,515 + H281DRAFT_00352 0.24 -0.8 385,801 + H281DRAFT_00352 0.55 -0.9 386,246 + H281DRAFT_00353 0.14 +0.4 386,383 + H281DRAFT_00353 0.45 -0.0 386,436 + H281DRAFT_00353 0.56 +0.5 386,641 - +0.8 386,674 - -0.2 386,718 + +0.1 386,758 + -0.6 386,932 + H281DRAFT_00354 0.22 -0.2 387,060 - H281DRAFT_00354 0.34 +1.2 387,075 + H281DRAFT_00354 0.35 -0.5 387,165 + H281DRAFT_00354 0.44 +0.6 387,165 + H281DRAFT_00354 0.44 +0.5 387,165 + H281DRAFT_00354 0.44 -0.2 387,168 - H281DRAFT_00354 0.45 -0.0 387,168 - H281DRAFT_00354 0.45 +0.1
Or see this region's nucleotide sequence