Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00240 and H281DRAFT_00241 are separated by 91 nucleotides H281DRAFT_00241 and H281DRAFT_00242 are separated by 153 nucleotides H281DRAFT_00242 and H281DRAFT_00243 are separated by 21 nucleotides H281DRAFT_00243 and H281DRAFT_00244 are separated by 99 nucleotides H281DRAFT_00244 and H281DRAFT_00245 are separated by 142 nucleotides
H281DRAFT_00240: H281DRAFT_00240 - two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family, at 258,659 to 260,059
_00240
H281DRAFT_00241: H281DRAFT_00241 - hypothetical protein, at 260,151 to 260,366
_00241
H281DRAFT_00242: H281DRAFT_00242 - hypothetical protein, at 260,520 to 260,795
_00242
H281DRAFT_00243: H281DRAFT_00243 - hypothetical protein, at 260,817 to 260,921
_00243
H281DRAFT_00244: H281DRAFT_00244 - trehalose 6-phosphate synthase, at 261,021 to 262,448
_00244
H281DRAFT_00245: H281DRAFT_00245 - MFS transporter, DHA2 family, multidrug resistance protein, at 262,591 to 264,039
_00245
Position (kb) 261
262
263 Strain fitness (log2 ratio) -1
0
1
2
3 at 260.058 kb on - strand at 260.412 kb on - strand at 260.448 kb on + strand at 260.470 kb on + strand at 260.470 kb on + strand at 260.471 kb on - strand at 260.724 kb on + strand, within H281DRAFT_00242 at 260.724 kb on + strand, within H281DRAFT_00242 at 260.725 kb on - strand, within H281DRAFT_00242 at 260.761 kb on - strand, within H281DRAFT_00242 at 260.815 kb on - strand at 260.917 kb on + strand at 260.918 kb on - strand at 261.007 kb on + strand at 261.007 kb on + strand at 261.007 kb on + strand at 261.007 kb on + strand at 261.207 kb on + strand, within H281DRAFT_00244 at 261.208 kb on - strand, within H281DRAFT_00244 at 261.237 kb on + strand, within H281DRAFT_00244 at 261.238 kb on - strand, within H281DRAFT_00244 at 261.313 kb on - strand, within H281DRAFT_00244 at 261.327 kb on + strand, within H281DRAFT_00244 at 261.328 kb on - strand, within H281DRAFT_00244 at 261.328 kb on - strand, within H281DRAFT_00244 at 261.328 kb on - strand, within H281DRAFT_00244 at 261.337 kb on - strand, within H281DRAFT_00244 at 261.511 kb on + strand, within H281DRAFT_00244 at 261.559 kb on - strand, within H281DRAFT_00244 at 261.663 kb on + strand, within H281DRAFT_00244 at 261.691 kb on - strand, within H281DRAFT_00244 at 261.702 kb on - strand, within H281DRAFT_00244 at 262.026 kb on + strand, within H281DRAFT_00244 at 262.041 kb on + strand, within H281DRAFT_00244 at 262.134 kb on + strand, within H281DRAFT_00244 at 262.134 kb on + strand, within H281DRAFT_00244 at 262.135 kb on - strand, within H281DRAFT_00244 at 262.358 kb on + strand at 262.358 kb on + strand at 262.622 kb on - strand at 262.673 kb on + strand at 262.673 kb on + strand at 262.674 kb on - strand at 262.831 kb on - strand, within H281DRAFT_00245 at 262.831 kb on - strand, within H281DRAFT_00245
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 260,058 - +0.7 260,412 - -0.5 260,448 + +0.8 260,470 + +1.3 260,470 + +0.1 260,471 - -0.2 260,724 + H281DRAFT_00242 0.74 +1.0 260,724 + H281DRAFT_00242 0.74 +1.6 260,725 - H281DRAFT_00242 0.74 -0.1 260,761 - H281DRAFT_00242 0.87 +0.0 260,815 - +1.2 260,917 + -0.3 260,918 - -0.3 261,007 + +0.2 261,007 + -0.4 261,007 + +0.3 261,007 + -0.2 261,207 + H281DRAFT_00244 0.13 -1.2 261,208 - H281DRAFT_00244 0.13 +0.5 261,237 + H281DRAFT_00244 0.15 -0.3 261,238 - H281DRAFT_00244 0.15 -0.2 261,313 - H281DRAFT_00244 0.20 -0.3 261,327 + H281DRAFT_00244 0.21 -0.4 261,328 - H281DRAFT_00244 0.21 +0.4 261,328 - H281DRAFT_00244 0.21 +0.1 261,328 - H281DRAFT_00244 0.21 +0.2 261,337 - H281DRAFT_00244 0.22 -0.4 261,511 + H281DRAFT_00244 0.34 +0.3 261,559 - H281DRAFT_00244 0.38 +0.4 261,663 + H281DRAFT_00244 0.45 +0.4 261,691 - H281DRAFT_00244 0.47 +0.8 261,702 - H281DRAFT_00244 0.48 +1.3 262,026 + H281DRAFT_00244 0.70 -0.1 262,041 + H281DRAFT_00244 0.71 +0.8 262,134 + H281DRAFT_00244 0.78 +0.3 262,134 + H281DRAFT_00244 0.78 +3.6 262,135 - H281DRAFT_00244 0.78 -0.7 262,358 + +3.4 262,358 + -0.3 262,622 - +0.2 262,673 + -0.5 262,673 + -0.2 262,674 - +2.6 262,831 - H281DRAFT_00245 0.17 -0.2 262,831 - H281DRAFT_00245 0.17 -0.6
Or see this region's nucleotide sequence