Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00215 and H281DRAFT_00216 are separated by 12 nucleotides H281DRAFT_00216 and H281DRAFT_00217 are separated by 9 nucleotides H281DRAFT_00217 and H281DRAFT_00218 are separated by 156 nucleotides
H281DRAFT_00215: H281DRAFT_00215 - Uncharacterized membrane protein YccC, at 233,107 to 235,215
_00215
H281DRAFT_00216: H281DRAFT_00216 - putative endonuclease, at 235,228 to 235,554
_00216
H281DRAFT_00217: H281DRAFT_00217 - hypothetical protein, at 235,564 to 236,733
_00217
H281DRAFT_00218: H281DRAFT_00218 - NAD+ synthase (glutamine-hydrolysing), at 236,890 to 238,635
_00218
Position (kb) 235
236
237 Strain fitness (log2 ratio) -2
-1
0
1
2 at 234.650 kb on - strand, within H281DRAFT_00215 at 234.712 kb on + strand, within H281DRAFT_00215 at 234.751 kb on + strand, within H281DRAFT_00215 at 234.751 kb on + strand, within H281DRAFT_00215 at 234.752 kb on - strand, within H281DRAFT_00215 at 235.443 kb on - strand, within H281DRAFT_00216 at 235.507 kb on - strand, within H281DRAFT_00216 at 235.538 kb on + strand at 235.539 kb on - strand at 235.605 kb on - strand at 235.605 kb on - strand at 235.991 kb on + strand, within H281DRAFT_00217 at 236.107 kb on + strand, within H281DRAFT_00217 at 236.107 kb on + strand, within H281DRAFT_00217 at 236.417 kb on + strand, within H281DRAFT_00217 at 236.438 kb on + strand, within H281DRAFT_00217 at 236.439 kb on - strand, within H281DRAFT_00217 at 236.469 kb on - strand, within H281DRAFT_00217 at 236.773 kb on + strand at 236.773 kb on + strand at 236.773 kb on + strand at 236.774 kb on - strand at 236.774 kb on - strand at 237.070 kb on + strand, within H281DRAFT_00218 at 237.192 kb on + strand, within H281DRAFT_00218 at 237.193 kb on - strand, within H281DRAFT_00218 at 237.193 kb on - strand, within H281DRAFT_00218
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 234,650 - H281DRAFT_00215 0.73 +0.7 234,712 + H281DRAFT_00215 0.76 -0.8 234,751 + H281DRAFT_00215 0.78 -0.9 234,751 + H281DRAFT_00215 0.78 +0.4 234,752 - H281DRAFT_00215 0.78 +0.6 235,443 - H281DRAFT_00216 0.66 +0.5 235,507 - H281DRAFT_00216 0.85 +0.4 235,538 + +0.2 235,539 - +0.2 235,605 - +1.8 235,605 - +0.1 235,991 + H281DRAFT_00217 0.36 +0.6 236,107 + H281DRAFT_00217 0.46 -1.3 236,107 + H281DRAFT_00217 0.46 +1.3 236,417 + H281DRAFT_00217 0.73 +0.5 236,438 + H281DRAFT_00217 0.75 +0.4 236,439 - H281DRAFT_00217 0.75 +0.3 236,469 - H281DRAFT_00217 0.77 +0.0 236,773 + +0.7 236,773 + +0.0 236,773 + +0.5 236,774 - +2.4 236,774 - -0.1 237,070 + H281DRAFT_00218 0.10 +0.2 237,192 + H281DRAFT_00218 0.17 -2.1 237,193 - H281DRAFT_00218 0.17 +1.3 237,193 - H281DRAFT_00218 0.17 +0.7
Or see this region's nucleotide sequence