Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00118 and H281DRAFT_00119 are separated by 52 nucleotides H281DRAFT_00119 and H281DRAFT_00120 are separated by 82 nucleotides H281DRAFT_00120 and H281DRAFT_00121 are separated by 11 nucleotides
H281DRAFT_00118: H281DRAFT_00118 - sulfate adenylyltransferase subunit 1, at 125,666 to 126,979
_00118
H281DRAFT_00119: H281DRAFT_00119 - uroporphyrinogen-III C-methyltransferase, at 127,032 to 127,787
_00119
H281DRAFT_00120: H281DRAFT_00120 - sirohydrochlorin cobaltochelatase, at 127,870 to 128,250
_00120
H281DRAFT_00121: H281DRAFT_00121 - lipopolysaccharide export system permease protein, at 128,262 to 129,410
_00121
Position (kb) 127
128
129 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 126.884 kb on + strand at 126.884 kb on + strand at 127.037 kb on + strand at 127.038 kb on - strand at 127.082 kb on + strand at 127.162 kb on - strand, within H281DRAFT_00119 at 127.360 kb on - strand, within H281DRAFT_00119 at 127.524 kb on + strand, within H281DRAFT_00119 at 127.525 kb on - strand, within H281DRAFT_00119 at 127.984 kb on + strand, within H281DRAFT_00120 at 128.007 kb on + strand, within H281DRAFT_00120 at 128.064 kb on + strand, within H281DRAFT_00120 at 128.064 kb on + strand, within H281DRAFT_00120 at 128.161 kb on + strand, within H281DRAFT_00120 at 128.162 kb on - strand, within H281DRAFT_00120 at 128.164 kb on + strand, within H281DRAFT_00120 at 128.264 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 126,884 + -2.5 126,884 + -2.3 127,037 + -0.3 127,038 - +0.3 127,082 + +0.7 127,162 - H281DRAFT_00119 0.17 -0.3 127,360 - H281DRAFT_00119 0.43 +0.1 127,524 + H281DRAFT_00119 0.65 -3.1 127,525 - H281DRAFT_00119 0.65 +0.3 127,984 + H281DRAFT_00120 0.30 -2.2 128,007 + H281DRAFT_00120 0.36 -2.6 128,064 + H281DRAFT_00120 0.51 -3.1 128,064 + H281DRAFT_00120 0.51 -3.2 128,161 + H281DRAFT_00120 0.76 +0.8 128,162 - H281DRAFT_00120 0.77 -2.5 128,164 + H281DRAFT_00120 0.77 -1.7 128,264 - +1.2
Or see this region's nucleotide sequence