Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00113 and H281DRAFT_00114 are separated by 228 nucleotides H281DRAFT_00114 and H281DRAFT_00115 are separated by 22 nucleotides H281DRAFT_00115 and H281DRAFT_00116 overlap by 4 nucleotides
H281DRAFT_00113: H281DRAFT_00113 - transcriptional regulator, LysR family, at 120,389 to 121,330
_00113
H281DRAFT_00114: H281DRAFT_00114 - sulfite reductase (NADPH) beta subunit, at 121,559 to 123,238
_00114
H281DRAFT_00115: H281DRAFT_00115 - Uncharacterized conserved protein, DUF934 family, at 123,261 to 123,809
_00115
H281DRAFT_00116: H281DRAFT_00116 - phosphoadenylylsulfate reductase (thioredoxin), at 123,806 to 124,558
_00116
Position (kb)
121
122
123
124 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 120.865 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 121.078 kb on + strand, within H281DRAFT_00113 at 121.249 kb on + strand at 121.249 kb on + strand at 121.251 kb on + strand at 121.252 kb on - strand at 121.332 kb on + strand at 121.333 kb on - strand at 121.334 kb on + strand at 121.428 kb on - strand at 121.435 kb on - strand at 121.451 kb on + strand at 121.451 kb on + strand at 121.452 kb on - strand at 121.457 kb on + strand at 121.457 kb on + strand at 121.563 kb on - strand at 121.563 kb on - strand at 121.563 kb on - strand at 121.568 kb on + strand at 121.569 kb on - strand at 121.694 kb on + strand at 121.698 kb on - strand at 121.712 kb on + strand at 121.713 kb on - strand at 122.120 kb on + strand, within H281DRAFT_00114 at 122.120 kb on + strand, within H281DRAFT_00114 at 122.268 kb on - strand, within H281DRAFT_00114 at 122.297 kb on + strand, within H281DRAFT_00114 at 122.298 kb on - strand, within H281DRAFT_00114 at 122.433 kb on - strand, within H281DRAFT_00114 at 122.545 kb on + strand, within H281DRAFT_00114 at 122.592 kb on + strand, within H281DRAFT_00114 at 122.654 kb on + strand, within H281DRAFT_00114 at 122.888 kb on + strand, within H281DRAFT_00114 at 122.888 kb on + strand at 123.005 kb on + strand, within H281DRAFT_00114 at 123.170 kb on + strand at 123.170 kb on + strand at 123.209 kb on + strand at 123.251 kb on + strand at 123.252 kb on - strand at 123.270 kb on - strand at 123.549 kb on - strand, within H281DRAFT_00115 at 123.549 kb on - strand, within H281DRAFT_00115 at 124.052 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 120,865 + H281DRAFT_00113 0.51 -3.2 120,867 + H281DRAFT_00113 0.51 -3.2 120,867 + H281DRAFT_00113 0.51 -2.7 120,867 + H281DRAFT_00113 0.51 -3.2 121,078 + H281DRAFT_00113 0.73 -1.3 121,249 + -0.7 121,249 + -1.4 121,251 + +0.0 121,252 - -2.7 121,332 + -0.3 121,333 - -2.5 121,334 + -0.6 121,428 - -1.5 121,435 - -0.4 121,451 + +0.1 121,451 + +0.4 121,452 - -3.7 121,457 + +0.1 121,457 + +0.9 121,563 - -3.9 121,563 - -3.5 121,563 - -3.7 121,568 + -0.9 121,569 - -2.6 121,694 + -0.6 121,698 - -2.2 121,712 + -4.2 121,713 - -4.8 122,120 + H281DRAFT_00114 0.33 -4.4 122,120 + H281DRAFT_00114 0.33 -2.1 122,268 - H281DRAFT_00114 0.42 -5.4 122,297 + H281DRAFT_00114 0.44 -2.7 122,298 - H281DRAFT_00114 0.44 -1.6 122,433 - H281DRAFT_00114 0.52 -2.3 122,545 + H281DRAFT_00114 0.59 -4.3 122,592 + H281DRAFT_00114 0.61 -4.3 122,654 + H281DRAFT_00114 0.65 -3.0 122,888 + H281DRAFT_00114 0.79 -4.2 122,888 + -0.2 123,005 + H281DRAFT_00114 0.86 -3.7 123,170 + -4.9 123,170 + -3.8 123,209 + -0.7 123,251 + +1.6 123,252 - -3.5 123,270 - -0.7 123,549 - H281DRAFT_00115 0.52 -5.3 123,549 - H281DRAFT_00115 0.52 -4.7 124,052 + +0.8
Or see this region's nucleotide sequence