Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00112 and H281DRAFT_00113 are separated by 42 nucleotides H281DRAFT_00113 and H281DRAFT_00114 are separated by 228 nucleotides
H281DRAFT_00112: H281DRAFT_00112 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 119,186 to 120,346
_00112
H281DRAFT_00113: H281DRAFT_00113 - transcriptional regulator, LysR family, at 120,389 to 121,330
_00113
H281DRAFT_00114: H281DRAFT_00114 - sulfite reductase (NADPH) beta subunit, at 121,559 to 123,238
_00114
Position (kb)
120
121
122 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 119.406 kb on + strand, within H281DRAFT_00112 at 119.455 kb on - strand, within H281DRAFT_00112 at 119.761 kb on + strand, within H281DRAFT_00112 at 119.762 kb on - strand, within H281DRAFT_00112 at 119.838 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112 at 120.156 kb on + strand, within H281DRAFT_00112 at 120.214 kb on + strand, within H281DRAFT_00112 at 120.221 kb on + strand, within H281DRAFT_00112 at 120.483 kb on + strand at 120.483 kb on + strand at 120.484 kb on - strand, within H281DRAFT_00113 at 120.484 kb on - strand, within H281DRAFT_00113 at 120.865 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 121.078 kb on + strand, within H281DRAFT_00113 at 121.249 kb on + strand at 121.249 kb on + strand at 121.251 kb on + strand at 121.252 kb on - strand at 121.332 kb on + strand at 121.333 kb on - strand at 121.334 kb on + strand at 121.428 kb on - strand at 121.435 kb on - strand at 121.451 kb on + strand at 121.451 kb on + strand at 121.452 kb on - strand at 121.457 kb on + strand at 121.457 kb on + strand at 121.563 kb on - strand at 121.563 kb on - strand at 121.563 kb on - strand at 121.568 kb on + strand at 121.569 kb on - strand at 121.694 kb on + strand at 121.698 kb on - strand at 121.712 kb on + strand at 121.713 kb on - strand at 122.120 kb on + strand, within H281DRAFT_00114 at 122.120 kb on + strand, within H281DRAFT_00114 at 122.268 kb on - strand, within H281DRAFT_00114 at 122.297 kb on + strand, within H281DRAFT_00114 at 122.298 kb on - strand, within H281DRAFT_00114
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 119,406 + H281DRAFT_00112 0.19 -0.1 119,455 - H281DRAFT_00112 0.23 -0.9 119,761 + H281DRAFT_00112 0.50 -0.7 119,762 - H281DRAFT_00112 0.50 +1.0 119,838 + H281DRAFT_00112 0.56 -1.1 119,892 + H281DRAFT_00112 0.61 -0.6 119,892 + H281DRAFT_00112 0.61 +1.3 120,156 + H281DRAFT_00112 0.84 +0.3 120,214 + H281DRAFT_00112 0.89 +0.1 120,221 + H281DRAFT_00112 0.89 -0.1 120,483 + -4.5 120,483 + -4.8 120,484 - H281DRAFT_00113 0.10 -3.2 120,484 - H281DRAFT_00113 0.10 -4.1 120,865 + H281DRAFT_00113 0.51 -3.2 120,867 + H281DRAFT_00113 0.51 -3.2 120,867 + H281DRAFT_00113 0.51 -2.7 120,867 + H281DRAFT_00113 0.51 -3.2 121,078 + H281DRAFT_00113 0.73 -1.3 121,249 + -0.7 121,249 + -1.4 121,251 + +0.0 121,252 - -2.7 121,332 + -0.3 121,333 - -2.5 121,334 + -0.6 121,428 - -1.5 121,435 - -0.4 121,451 + +0.1 121,451 + +0.4 121,452 - -3.7 121,457 + +0.1 121,457 + +0.9 121,563 - -3.9 121,563 - -3.5 121,563 - -3.7 121,568 + -0.9 121,569 - -2.6 121,694 + -0.6 121,698 - -2.2 121,712 + -4.2 121,713 - -4.8 122,120 + H281DRAFT_00114 0.33 -4.4 122,120 + H281DRAFT_00114 0.33 -2.1 122,268 - H281DRAFT_00114 0.42 -5.4 122,297 + H281DRAFT_00114 0.44 -2.7 122,298 - H281DRAFT_00114 0.44 -1.6
Or see this region's nucleotide sequence