Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25810

Experiment: 1-ethyl-3-methylimidazolium lysine 10.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 10.5 mM
5,687,315	+		AO353_25805	0.27	-0.5
5,687,315	+		AO353_25805	0.27	-1.5
5,687,316	-		AO353_25805	0.27	-2.3
5,687,375	+		AO353_25805	0.32	+1.6
5,687,375	+		AO353_25805	0.32	-0.7
5,687,375	+		AO353_25805	0.32	+2.2
5,687,375	+		AO353_25805	0.32	-1.7
5,687,375	+		AO353_25805	0.32	+1.4
5,687,375	+				-1.5
5,687,375	+		AO353_25805	0.32	+0.8
5,687,375	+		AO353_25805	0.32	-0.2
5,687,375	+		AO353_25805	0.32	-0.5
5,687,376	-				+1.5
5,687,376	-				-0.5
5,687,376	-		AO353_25805	0.32	-2.3
5,687,376	-		AO353_25805	0.32	-2.4
5,687,376	-		AO353_25805	0.32	+1.0
5,687,376	-		AO353_25805	0.32	-0.8
5,687,376	-		AO353_25805	0.32	-0.5
5,687,376	-		AO353_25805	0.32	+0.5
5,687,376	-		AO353_25805	0.32	-0.7
5,687,376	-		AO353_25805	0.32	+0.5
5,687,376	-		AO353_25805	0.32	-0.2
5,687,376	-		AO353_25805	0.32	+0.2
5,687,384	+		AO353_25805	0.32	+1.5
5,687,502	-		AO353_25805	0.41	-1.1
5,687,564	+		AO353_25805	0.46	-2.1
5,687,564	+		AO353_25805	0.46	-0.1
5,687,564	+		AO353_25805	0.46	-0.5
5,687,565	-		AO353_25805	0.46	+0.1
5,687,565	-		AO353_25805	0.46	-1.1
5,687,565	-		AO353_25805	0.46	-0.5
5,687,565	-		AO353_25805	0.46	-0.3
5,687,565	-		AO353_25805	0.46	-1.2
5,687,565	-		AO353_25805	0.46	+0.5
5,687,565	-		AO353_25805	0.46	-0.0
5,687,565	-		AO353_25805	0.46	+0.5
5,687,565	-		AO353_25805	0.46	-0.5
5,687,635	-		AO353_25805	0.52	-1.1
5,687,653	+		AO353_25805	0.53	+1.1
5,687,654	-		AO353_25805	0.53	-0.4
5,687,660	+		AO353_25805	0.54	-0.1
5,687,660	+		AO353_25805	0.54	-0.5
5,687,660	+		AO353_25805	0.54	-0.8
5,687,661	-		AO353_25805	0.54	+0.1
5,687,661	-		AO353_25805	0.54	-1.1
5,687,661	-		AO353_25805	0.54	-0.5
5,687,661	-		AO353_25805	0.54	-0.5
5,687,661	-		AO353_25805	0.54	-1.5
5,687,661	-		AO353_25805	0.54	+1.5
5,687,661	-		AO353_25805	0.54	-0.1
5,687,788	-		AO353_25805	0.64	+0.5
5,687,888	+		AO353_25805	0.72	-0.7
5,687,888	+		AO353_25805	0.72	+0.5
5,687,888	+		AO353_25805	0.72	-0.7
5,687,888	+		AO353_25805	0.72	-0.8
5,687,888	+		AO353_25805	0.72	+0.8
5,687,888	+		AO353_25805	0.72	-2.5
5,687,888	+		AO353_25805	0.72	-0.5
5,687,889	-		AO353_25805	0.72	-1.5
5,687,889	-		AO353_25805	0.72	-1.1
5,687,889	-		AO353_25805	0.72	+1.5
5,687,890	+		AO353_25805	0.72	+0.2
5,687,890	+		AO353_25805	0.72	-2.8
5,687,890	+		AO353_25805	0.72	-0.2
5,687,891	-		AO353_25805	0.72	-2.5
5,687,891	-		AO353_25805	0.72	+1.5
5,687,891	-		AO353_25805	0.72	+0.2
5,687,891	-		AO353_25805	0.72	-0.8
5,687,894	+		AO353_25805	0.72	+1.5
5,687,894	+		AO353_25805	0.72	-0.8
5,687,894	+		AO353_25805	0.72	-0.1
5,687,894	+		AO353_25805	0.72	-0.5
5,687,894	+		AO353_25805	0.72	-0.6
5,687,894	+		AO353_25805	0.72	+2.1
5,687,894	+		AO353_25805	0.72	+0.7
5,687,894	+		AO353_25805	0.72	+1.2
5,687,895	-		AO353_25805	0.72	-1.8
5,687,895	-		AO353_25805	0.72	-0.2
5,687,895	-		AO353_25805	0.72	-0.2
5,687,895	-		AO353_25805	0.72	-1.1
5,687,895	-		AO353_25805	0.72	-2.1
5,687,895	-		AO353_25805	0.72	+1.0
5,687,895	-		AO353_25805	0.72	+0.0
5,687,895	-		AO353_25805	0.72	-0.3
5,687,895	-		AO353_25805	0.72	-0.7
5,687,895	-		AO353_25805	0.72	-0.0
5,687,934	+		AO353_25805	0.75	-0.8
5,687,935	-		AO353_25805	0.75	-0.4
5,688,022	+		AO353_25805	0.82	+1.1
5,688,022	+		AO353_25805	0.82	+0.5
5,688,023	-		AO353_25805	0.82	-0.5
5,688,023	-		AO353_25805	0.82	-1.1
5,688,023	-		AO353_25805	0.82	-0.4
5,688,023	-		AO353_25805	0.82	-1.1
5,688,023	-		AO353_25805	0.82	-0.3
5,688,110	+		AO353_25805	0.89	+0.5
5,688,110	+		AO353_25805	0.89	-0.0
5,688,110	+		AO353_25805	0.89	+0.3
5,688,111	-		AO353_25805	0.89	-0.8
5,688,239	+				-1.5
5,688,239	+				-2.1
5,688,239	+				-0.0
5,688,239	+				-1.1
5,688,239	+				-1.3
5,688,240	-				-1.1
5,688,240	-				+0.2
5,688,240	-				+1.8
5,688,240	-				-0.1
5,688,240	-				-1.5
5,688,240	-				-1.3
5,688,246	-				+1.1
5,688,412	+				-0.2
5,688,412	+				-0.1
5,688,412	+				+0.7
5,688,412	+				+0.2
5,688,412	+				+0.5
5,688,413	-				-0.6
5,688,413	-				+0.2
5,688,413	-				-0.8
5,688,449	+		AO353_25810	0.10	-0.3
5,688,450	-		AO353_25810	0.10	-2.0
5,688,450	-		AO353_25810	0.10	-0.8
5,688,659	+		AO353_25810	0.26	+1.7
5,688,660	-		AO353_25810	0.26	+0.1
5,688,660	-		AO353_25810	0.26	-2.1
5,688,752	+		AO353_25810	0.33	-0.0
5,688,753	-		AO353_25810	0.33	+0.4
5,688,753	-		AO353_25810	0.33	-1.0
5,688,753	-		AO353_25810	0.33	-1.1
5,688,837	+		AO353_25810	0.40	+1.5
5,688,837	+		AO353_25810	0.40	-0.6
5,688,837	+		AO353_25810	0.40	-0.4
5,688,923	-		AO353_25810	0.46	+0.2
5,688,923	-		AO353_25810	0.46	-0.1
5,688,923	-		AO353_25810	0.46	+1.5
5,688,975	+		AO353_25810	0.50	+0.8
5,688,975	+		AO353_25810	0.50	+0.3
5,688,975	+		AO353_25810	0.50	+1.0
5,688,975	+		AO353_25810	0.50	-0.6
5,688,976	-		AO353_25810	0.50	+1.5
5,688,976	-		AO353_25810	0.50	+2.7
5,688,976	-		AO353_25810	0.50	+0.1
5,689,077	+		AO353_25810	0.58	-0.7
5,689,078	-		AO353_25810	0.58	-1.3
5,689,078	-		AO353_25810	0.58	-0.2
5,689,336	-		AO353_25810	0.77	+0.3
5,689,336	-		AO353_25810	0.77	+1.0
5,689,336	-		AO353_25810	0.77	+0.3
5,689,480	-		AO353_25810	0.88	+1.7
5,689,480	-		AO353_25810	0.88	+0.2
5,689,530	+				-0.5
5,689,531	-				-0.0
5,689,531	-				-0.5
5,689,558	-				+0.8
5,689,573	+				-0.5
5,689,607	-				+0.5
5,689,703	+				+1.2
5,689,704	-				-0.8
5,689,733	+				-0.0
5,689,734	-				-0.8
5,689,741	-				-0.1
5,689,743	+				-0.2
5,689,743	+				-0.7
5,689,743	+				+0.0
5,689,744	-				+0.1
5,689,744	-				-2.1
5,689,747	-				-1.6
5,689,747	-				+0.0
5,689,747	-				+0.1
5,689,763	-				-1.8
5,689,769	+				+0.8
5,689,782	+				-2.7
5,689,846	+				-1.3
5,689,847	-				-1.5
5,689,848	+				-2.3
5,689,849	-				-0.2
5,689,909	+				-1.8
5,689,910	-				+0.3
5,689,910	-				-1.3
5,689,910	-				-1.2
5,689,915	+				+0.3
5,689,915	+				+0.1
5,689,916	-				+2.1
5,689,916	-				+0.2
5,690,037	-		AO353_25815	0.20	-0.7
5,690,151	+		AO353_25815	0.63	-1.1
5,690,151	+		AO353_25815	0.63	-1.1
5,690,151	+		AO353_25815	0.63	+0.5
5,690,151	+		AO353_25815	0.63	-0.5
5,690,151	+		AO353_25815	0.63	-0.3
5,690,151	+		AO353_25815	0.63	-0.9
5,690,151	+		AO353_25815	0.63	-0.3
5,690,152	-		AO353_25815	0.63	+0.2
5,690,152	-		AO353_25815	0.63	-0.9
5,690,152	-		AO353_25815	0.63	+0.2
5,690,152	-		AO353_25815	0.63	-1.1
5,690,296	+				-0.9
5,690,361	+				-0.1
5,690,361	+				+0.9
5,690,361	+				+1.7
5,690,361	+				+0.9
5,690,362	-				+0.8
5,690,363	+				-1.2
5,690,363	+				-2.0
5,690,363	+				-0.7
5,690,364	-				-1.8
5,690,470	+				+0.5