Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21470

Experiment: 1-ethyl-3-methylimidazolium lysine 10.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 10.5 mM
4,694,949	+		AO353_21460	0.67	+1.7
4,694,949	+		AO353_21460	0.67	+2.1
4,694,950	-		AO353_21460	0.67	+1.3
4,694,950	-		AO353_21460	0.67	-0.1
4,694,950	-		AO353_21460	0.67	+1.3
4,694,950	-		AO353_21460	0.67	+0.3
4,694,950	-		AO353_21460	0.67	-1.1
4,694,950	-		AO353_21460	0.67	+0.9
4,694,950	-		AO353_21460	0.67	+0.5
4,694,950	-		AO353_21460	0.67	+0.7
4,694,950	-		AO353_21460	0.67	+0.8
4,695,006	+		AO353_21460	0.70	+0.7
4,695,006	+		AO353_21460	0.70	+0.1
4,695,006	+		AO353_21460	0.70	-0.6
4,695,006	+		AO353_21460	0.70	+1.1
4,695,006	+		AO353_21460	0.70	+0.5
4,695,006	+		AO353_21460	0.70	+1.5
4,695,007	-		AO353_21460	0.70	-0.1
4,695,007	-		AO353_21460	0.70	+0.5
4,695,007	-		AO353_21460	0.70	+1.2
4,695,007	-		AO353_21460	0.70	+2.7
4,695,007	-		AO353_21460	0.70	+1.1
4,695,060	+		AO353_21460	0.73	+0.2
4,695,061	-		AO353_21460	0.73	-0.3
4,695,129	+		AO353_21460	0.77	-0.2
4,695,362	+				+3.0
4,695,475	+				+1.1
4,695,475	+				+0.4
4,695,475	+				+1.3
4,695,476	-				-0.6
4,695,476	-				+0.7
4,695,476	-				+0.7
4,695,476	-				-1.1
4,695,619	+		AO353_21465	0.33	-0.3
4,695,619	+		AO353_21465	0.33	+0.2
4,695,647	+		AO353_21465	0.41	+0.5
4,695,647	+		AO353_21465	0.41	+0.1
4,695,647	+		AO353_21465	0.41	+0.3
4,695,879	-				-0.7
4,695,879	-				-0.1
4,695,951	+				+1.1
4,695,951	+				+1.0
4,695,952	-				+0.1
4,695,964	+				-0.2
4,695,964	+				+0.7
4,695,964	+				+0.9
4,695,964	+				+0.4
4,695,965	-				+1.4
4,695,965	-				+1.8
4,695,965	-				+2.3
4,695,998	+				+2.4
4,695,999	-				+0.0
4,696,174	+		AO353_21470	0.11	+0.7
4,696,174	+		AO353_21470	0.11	-0.1
4,696,174	+		AO353_21470	0.11	+1.3
4,696,174	+		AO353_21470	0.11	+0.5
4,696,174	+		AO353_21470	0.11	+0.1
4,696,174	+		AO353_21470	0.11	+0.5
4,696,174	+		AO353_21470	0.11	+1.0
4,696,174	+		AO353_21470	0.11	-0.7
4,696,174	+		AO353_21470	0.11	+0.7
4,696,174	+		AO353_21470	0.11	+0.2
4,696,174	+		AO353_21470	0.11	-1.1
4,696,174	+		AO353_21470	0.11	+1.5
4,696,174	+		AO353_21470	0.11	+0.4
4,696,174	+		AO353_21470	0.11	+0.5
4,696,175	-		AO353_21470	0.11	+1.5
4,696,175	-		AO353_21470	0.11	+0.7
4,696,175	-		AO353_21470	0.11	+0.2
4,696,175	-		AO353_21470	0.11	-1.3
4,696,175	-		AO353_21470	0.11	+1.1
4,696,175	-		AO353_21470	0.11	+1.4
4,696,175	-		AO353_21470	0.11	-0.1
4,696,255	+		AO353_21470	0.14	-1.3
4,696,255	+		AO353_21470	0.14	+0.1
4,696,255	+		AO353_21470	0.14	-0.7
4,696,255	+		AO353_21470	0.14	-0.9
4,696,256	-		AO353_21470	0.14	+1.9
4,696,256	-		AO353_21470	0.14	+0.7
4,696,284	+		AO353_21470	0.15	-2.1
4,696,401	+		AO353_21470	0.19	+1.0
4,696,570	+		AO353_21470	0.25	+2.1
4,696,570	+		AO353_21470	0.25	-0.3
4,696,570	+		AO353_21470	0.25	+1.1
4,696,570	+		AO353_21470	0.25	+0.0
4,696,570	+				+1.3
4,696,571	-		AO353_21470	0.25	-0.3
4,696,571	-		AO353_21470	0.25	+1.7
4,696,571	-		AO353_21470	0.25	+0.3
4,696,571	-		AO353_21470	0.25	-0.0
4,696,584	-		AO353_21470	0.25	+1.3
4,696,584	-		AO353_21470	0.25	+1.3
4,696,584	-		AO353_21470	0.25	+1.1
4,696,885	+		AO353_21470	0.35	+0.7
4,696,885	+		AO353_21470	0.35	+0.7
4,696,886	-		AO353_21470	0.36	-0.3
4,696,886	-		AO353_21470	0.36	-0.8
4,696,886	-		AO353_21470	0.36	+0.2
4,696,886	-		AO353_21470	0.36	-2.5
4,697,070	-		AO353_21470	0.42	+1.3
4,697,168	-		AO353_21470	0.45	+0.5
4,697,168	-		AO353_21470	0.45	+0.7
4,697,168	-		AO353_21470	0.45	+1.4
4,697,195	+		AO353_21470	0.46	+0.7
4,697,196	-		AO353_21470	0.46	+0.9
4,697,209	+		AO353_21470	0.47	-0.9
4,697,209	+		AO353_21470	0.47	-1.4
4,697,209	+		AO353_21470	0.47	+0.5
4,697,209	+		AO353_21470	0.47	-0.1
4,697,209	+		AO353_21470	0.47	-1.3
4,697,210	-		AO353_21470	0.47	+0.7
4,697,210	-		AO353_21470	0.47	+0.7
4,697,210	-		AO353_21470	0.47	-0.9
4,697,210	-		AO353_21470	0.47	+0.7
4,697,288	-		AO353_21470	0.49	+0.7
4,697,476	-		AO353_21470	0.56	-0.3
4,697,597	+		AO353_21470	0.60	+1.5
4,697,597	+		AO353_21470	0.60	-0.3
4,697,598	-		AO353_21470	0.60	+1.1
4,697,783	+		AO353_21470	0.66	-0.7
4,697,783	+		AO353_21470	0.66	+2.0
4,697,784	-		AO353_21470	0.66	+1.1
4,697,867	-		AO353_21470	0.69	+1.0
4,697,867	-		AO353_21470	0.69	-0.7
4,697,909	-		AO353_21470	0.71	+0.9
4,697,927	+		AO353_21470	0.71	+1.4
4,697,927	+		AO353_21470	0.71	-0.3
4,697,927	+		AO353_21470	0.71	+0.8
4,697,927	+		AO353_21470	0.71	-0.3
4,697,927	+		AO353_21470	0.71	+0.8
4,697,927	+		AO353_21470	0.71	+0.1
4,697,927	+		AO353_21470	0.71	+0.7
4,697,927	+		AO353_21470	0.71	-0.1
4,697,928	-		AO353_21470	0.71	+0.9
4,697,928	-		AO353_21470	0.71	+1.0
4,697,928	-		AO353_21470	0.71	+1.0
4,697,928	-		AO353_21470	0.71	+1.3
4,697,928	-		AO353_21470	0.71	-0.3
4,697,953	+		AO353_21470	0.72	+1.1
4,697,953	+		AO353_21470	0.72	+0.7
4,697,953	+		AO353_21470	0.72	+2.3
4,697,953	+		AO353_21470	0.72	+1.3
4,697,953	+		AO353_21470	0.72	+1.8
4,697,953	+		AO353_21470	0.72	+0.7
4,697,953	+		AO353_21470	0.72	+1.1
4,697,953	+		AO353_21470	0.72	+0.2
4,697,953	+		AO353_21470	0.72	-0.5
4,697,953	+		AO353_21470	0.72	+0.7
4,697,953	+		AO353_21470	0.72	+0.7
4,697,953	+		AO353_21470	0.72	+2.3
4,697,954	-		AO353_21470	0.72	+1.8
4,697,954	-		AO353_21470	0.72	-0.9
4,697,954	-		AO353_21470	0.72	-0.1
4,697,954	-		AO353_21470	0.72	-0.6
4,697,954	-		AO353_21470	0.72	+1.9
4,697,954	-		AO353_21470	0.72	+0.1
4,698,041	-		AO353_21470	0.75	+0.9
4,698,151	+		AO353_21470	0.79	+0.4
4,698,151	+		AO353_21470	0.79	+0.1
4,698,152	-		AO353_21470	0.79	-0.3
4,698,205	+		AO353_21470	0.81	+0.1
4,698,205	+		AO353_21470	0.81	+0.3
4,698,205	+		AO353_21470	0.81	+0.5
4,698,205	+		AO353_21470	0.81	-1.9
4,698,206	-		AO353_21470	0.81	+0.9
4,698,206	-				+0.7
4,698,206	-		AO353_21470	0.81	-0.5
4,698,286	+		AO353_21470	0.83	+0.4
4,698,286	+		AO353_21470	0.83	+1.0
4,698,286	+		AO353_21470	0.83	-1.1
4,698,286	+		AO353_21470	0.83	+0.7
4,698,286	+		AO353_21470	0.83	+0.7
4,698,286	+		AO353_21470	0.83	+1.0
4,698,287	-		AO353_21470	0.84	+1.3
4,698,287	-		AO353_21470	0.84	-0.2
4,698,287	-		AO353_21470	0.84	-0.6
4,698,323	-		AO353_21470	0.85	+0.4
4,698,472	+		AO353_21470	0.90	-0.0
4,698,472	+		AO353_21470	0.90	-0.2
4,698,472	+		AO353_21470	0.90	+1.1
4,698,472	+		AO353_21470	0.90	+1.3
4,698,472	+		AO353_21470	0.90	+0.9
4,698,472	+		AO353_21470	0.90	-0.5
4,698,472	+		AO353_21470	0.90	+1.1
4,698,472	+		AO353_21470	0.90	+0.9
4,698,472	+		AO353_21470	0.90	+1.3
4,698,472	+		AO353_21470	0.90	-0.9
4,698,472	+		AO353_21470	0.90	+0.0
4,698,472	+		AO353_21470	0.90	-1.3
4,698,472	+		AO353_21470	0.90	+1.1
4,698,473	-		AO353_21470	0.90	-0.3
4,698,473	-		AO353_21470	0.90	+0.7
4,698,473	-		AO353_21470	0.90	+0.3
4,698,473	-		AO353_21470	0.90	+0.5
4,698,473	-		AO353_21470	0.90	+0.2
4,698,473	-		AO353_21470	0.90	-0.3
4,698,473	-		AO353_21470	0.90	+0.7
4,698,473	-		AO353_21470	0.90	+2.3
4,698,473	-		AO353_21470	0.90	-0.1
4,698,473	-		AO353_21470	0.90	+0.7
4,698,473	-		AO353_21470	0.90	+1.4
4,698,473	-		AO353_21470	0.90	+0.3
4,698,473	-		AO353_21470	0.90	-0.6
4,698,473	-		AO353_21470	0.90	+0.7
4,698,473	-		AO353_21470	0.90	-0.9
4,698,473	-		AO353_21470	0.90	+0.5
4,698,475	+		AO353_21470	0.90	+1.3
4,698,484	+				-0.3
4,698,485	-				-0.0
4,698,485	-				+0.6
4,698,734	+				+1.0
4,698,734	+				+2.7
4,698,734	+				+0.4
4,698,735	-				+1.0
4,698,750	+				+0.4
4,698,750	+				+0.0
4,698,750	+				+0.7
4,698,750	+				-0.9
4,698,750	+				+0.9
4,698,750	+				+0.5
4,698,756	+				+1.7
4,698,756	+				+0.4
4,698,756	+				+0.2
4,698,757	-				+0.0
4,698,757	-				+3.7
4,698,767	+				+2.0
4,698,767	+				+1.1
4,698,767	+				+0.0
4,698,767	+				-0.9
4,698,768	-				+0.7
4,698,768	-				+0.4
4,698,768	-				+0.4
4,698,775	+				+0.5
4,698,775	+				+1.3
4,698,776	-				+0.7
4,698,776	-				+0.7
4,698,776	-				-1.3
4,698,776	-				+1.0
4,698,802	+				-0.1
4,698,802	+				+0.2
4,698,802	+				-0.4
4,698,802	+				+0.3
4,698,802	+				-2.3
4,698,802	+				+1.7
4,698,803	-				-2.6
4,698,803	-				-0.1
4,698,803	-				-1.5
4,698,803	-				-0.0
4,698,803	-				-1.6
4,698,803	-				-0.8
4,698,849	+				+0.9
4,698,850	-				+0.5
4,698,850	-				+0.2
4,698,850	-				+2.1
4,698,856	+				+0.3
4,698,856	+				+0.7
4,698,856	+				+0.5
4,698,856	+				+0.4
4,698,857	-				-0.3
4,698,857	-				-0.9
4,698,896	+				-1.3
4,698,896	+				-1.9
4,698,938	-				-1.6
4,698,956	+				-2.3
4,698,957	-				-3.6
4,698,984	+				-0.7
4,698,985	-				-0.9
4,698,985	-				-0.9
4,698,985	-				+1.2
4,698,993	+				-1.3
4,698,994	-				-0.8
4,698,994	-				+0.3
4,699,410	+		AO353_21475	0.39	-1.6
4,699,410	+		AO353_21475	0.39	-0.9
4,699,410	+		AO353_21475	0.39	-0.2
4,699,410	+		AO353_21475	0.39	+1.7
4,699,410	+		AO353_21475	0.39	+2.3
4,699,410	+		AO353_21475	0.39	+0.4
4,699,410	+		AO353_21475	0.39	+0.7
4,699,410	+		AO353_21475	0.39	+0.3
4,699,410	+				+0.1
4,699,411	-		AO353_21475	0.39	-1.9
4,699,411	-		AO353_21475	0.39	-1.3
4,699,411	-		AO353_21475	0.39	+0.1
4,699,411	-		AO353_21475	0.39	-0.1
4,699,550	-		AO353_21475	0.52	+1.0
4,699,614	+		AO353_21475	0.58	-0.3
4,699,614	+		AO353_21475	0.58	+0.5
4,699,615	-		AO353_21475	0.59	+0.0
4,699,615	-		AO353_21475	0.59	-0.3