Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14070

Experiment: 1-ethyl-3-methylimidazolium lysine 10.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 10.5 mM
3,128,692	+		AO353_14065	0.60	-0.4
3,128,692	+		AO353_14065	0.60	+0.2
3,128,693	-		AO353_14065	0.60	-1.1
3,128,781	+		AO353_14065	0.64	-3.1
3,128,781	+		AO353_14065	0.64	+0.5
3,128,781	+		AO353_14065	0.64	-1.3
3,128,781	+		AO353_14065	0.64	+0.8
3,128,781	+		AO353_14065	0.64	-0.3
3,128,781	+		AO353_14065	0.64	-0.2
3,128,781	+		AO353_14065	0.64	-1.7
3,128,781	+		AO353_14065	0.64	+0.6
3,128,781	+		AO353_14065	0.64	-1.3
3,128,781	+		AO353_14065	0.64	-0.2
3,128,781	+		AO353_14065	0.64	+0.6
3,128,781	+		AO353_14065	0.64	-0.5
3,128,781	+		AO353_14065	0.64	-0.3
3,128,782	-				+0.3
3,128,782	-		AO353_14065	0.64	+0.9
3,128,782	-		AO353_14065	0.64	+1.3
3,128,810	+		AO353_14065	0.66	-0.1
3,128,810	+		AO353_14065	0.66	+0.8
3,128,810	+		AO353_14065	0.66	+0.3
3,128,810	+		AO353_14065	0.66	-0.3
3,128,810	+		AO353_14065	0.66	-0.4
3,128,810	+		AO353_14065	0.66	+1.7
3,128,811	-		AO353_14065	0.66	+0.6
3,128,875	+		AO353_14065	0.70	-0.1
3,128,876	-		AO353_14065	0.70	-0.1
3,128,988	+		AO353_14065	0.76	+1.9
3,128,989	-		AO353_14065	0.76	-0.4
3,128,989	-		AO353_14065	0.76	-0.6
3,128,989	-		AO353_14065	0.76	-0.5
3,129,083	-		AO353_14065	0.81	-0.9
3,129,083	-		AO353_14065	0.81	-0.2
3,129,108	+		AO353_14065	0.82	-0.5
3,129,108	+		AO353_14065	0.82	-0.6
3,129,108	+		AO353_14065	0.82	+0.2
3,129,109	-		AO353_14065	0.82	-0.3
3,129,109	-		AO353_14065	0.82	-0.2
3,129,127	+		AO353_14065	0.83	+2.9
3,129,127	+		AO353_14065	0.83	-0.7
3,129,127	+		AO353_14065	0.83	-0.3
3,129,127	+		AO353_14065	0.83	-0.3
3,129,128	-		AO353_14065	0.83	-0.5
3,129,128	-		AO353_14065	0.83	+0.8
3,129,128	-		AO353_14065	0.83	-0.1
3,129,128	-		AO353_14065	0.83	+0.3
3,129,128	-		AO353_14065	0.83	-0.3
3,129,128	-		AO353_14065	0.83	-1.3
3,129,128	-		AO353_14065	0.83	-2.0
3,129,128	-		AO353_14065	0.83	-0.3
3,129,128	-		AO353_14065	0.83	+0.2
3,129,128	-		AO353_14065	0.83	+0.2
3,129,448	-				-0.0
3,129,458	+				-0.7
3,129,458	+				+0.5
3,129,483	+				-0.6
3,129,484	-				+1.3
3,129,535	-				+0.1
3,129,556	-				+0.7
3,129,556	-				-0.7
3,129,556	-				+0.7
3,129,557	+				-0.0
3,129,557	+				+0.9
3,129,557	+				+0.2
3,129,557	+				+0.3
3,129,558	-				+0.3
3,129,558	-				-0.0
3,129,558	-				-0.5
3,129,620	+				-2.2
3,129,620	+				-1.6
3,129,620	+				-1.0
3,129,620	+				-0.7
3,129,620	+				-0.4
3,129,620	+				-0.4
3,129,620	+				+0.8
3,129,620	+				-1.0
3,129,620	+				+0.7
3,129,620	+				-1.0
3,129,620	+				-1.4
3,129,620	+				+0.7
3,129,620	+				+0.4
3,129,621	-				-0.3
3,129,621	-				-0.1
3,129,621	-				+0.4
3,129,621	-				+0.3
3,129,621	-				-0.0
3,129,621	-				-0.4
3,129,621	-				+0.4
3,129,621	-				-0.4
3,129,621	-				-0.5
3,129,650	+		AO353_14070	0.12	+0.2
3,129,650	+		AO353_14070	0.12	+1.6
3,129,650	+		AO353_14070	0.12	+0.7
3,129,650	+		AO353_14070	0.12	+0.7
3,129,650	+		AO353_14070	0.12	-0.3
3,129,650	+		AO353_14070	0.12	-1.7
3,129,650	+		AO353_14070	0.12	-1.3
3,129,650	+		AO353_14070	0.12	+0.4
3,129,651	-		AO353_14070	0.12	+1.0
3,129,651	-		AO353_14070	0.12	-0.0
3,129,824	+		AO353_14070	0.47	+2.1
3,130,007	+		AO353_14070	0.85	-0.2
3,130,007	+		AO353_14070	0.85	+0.2
3,130,007	+		AO353_14070	0.85	-1.4
3,130,007	+		AO353_14070	0.85	+1.3
3,130,007	+		AO353_14070	0.85	-1.3
3,130,007	+		AO353_14070	0.85	+0.8
3,130,008	-		AO353_14070	0.85	+0.9
3,130,008	-		AO353_14070	0.85	-0.7
3,130,056	-				-0.0
3,130,143	+				+0.3
3,130,143	+				-0.4
3,130,164	-				-2.8
3,130,164	-				+0.4
3,130,164	-				+0.3
3,130,172	-				-1.2
3,130,172	-				+0.1
3,130,293	+				-0.7
3,130,301	+				+0.1
3,130,301	+				+0.1
3,130,301	+				-2.0
3,130,301	+				-0.0
3,130,301	+				+1.7
3,130,301	+				-2.4
3,130,301	+				+2.0
3,130,302	-				+0.3
3,130,302	-				-0.3
3,130,302	-				+0.3
3,130,302	-				+1.6
3,130,302	-				-1.7
3,130,361	+				+0.3
3,130,361	+				-0.9
3,130,361	+				-0.0
3,130,361	+				+0.3
3,130,361	+				+0.4
3,130,362	-				+0.2
3,130,362	-				-0.4
3,130,418	+		AO353_14075	0.28	-1.4
3,130,418	+		AO353_14075	0.28	-0.7
3,130,418	+		AO353_14075	0.28	+2.3
3,130,418	+		AO353_14075	0.28	+1.4
3,130,418	+		AO353_14075	0.28	-1.7
3,130,418	+		AO353_14075	0.28	-0.7
3,130,418	+		AO353_14075	0.28	-1.7
3,130,418	+		AO353_14075	0.28	-1.2
3,130,418	+		AO353_14075	0.28	+0.0
3,130,418	+		AO353_14075	0.28	+1.3
3,130,418	+		AO353_14075	0.28	+0.9
3,130,419	-		AO353_14075	0.28	+1.0
3,130,419	-		AO353_14075	0.28	-0.3
3,130,419	-		AO353_14075	0.28	-0.0
3,130,419	-		AO353_14075	0.28	+0.5
3,130,419	-		AO353_14075	0.28	+0.6
3,130,419	-		AO353_14075	0.28	+2.1
3,130,419	-		AO353_14075	0.28	-0.6
3,130,419	-		AO353_14075	0.28	-0.0
3,130,419	-		AO353_14075	0.28	-0.7
3,130,419	-		AO353_14075	0.28	+0.5
3,130,419	-		AO353_14075	0.28	+1.0
3,130,419	-		AO353_14075	0.28	+0.2
3,130,419	-		AO353_14075	0.28	-2.5
3,130,419	-		AO353_14075	0.28	-0.5
3,130,419	-		AO353_14075	0.28	-0.3
3,130,425	+		AO353_14075	0.30	+1.0
3,130,437	+		AO353_14075	0.34	-0.4
3,130,437	+		AO353_14075	0.34	+1.2
3,130,437	+		AO353_14075	0.34	-0.9
3,130,437	+		AO353_14075	0.34	-3.3
3,130,438	-		AO353_14075	0.34	+0.3
3,130,438	-		AO353_14075	0.34	+0.3
3,130,438	-		AO353_14075	0.34	+1.7
3,130,438	-		AO353_14075	0.34	+0.5
3,130,438	-		AO353_14075	0.34	-0.7
3,130,438	-		AO353_14075	0.34	+0.6
3,130,438	-		AO353_14075	0.34	+1.3
3,130,438	-		AO353_14075	0.34	-0.7
3,130,667	+				-1.2
3,130,667	+				-0.9
3,130,667	+				+2.6
3,130,668	-				-0.5
3,130,668	-				+0.3
3,130,768	+				+0.3
3,130,768	+				-0.3
3,130,768	+				+0.1
3,130,768	+				-0.7
3,130,768	+				-0.1
3,130,768	+				-0.1
3,130,769	-				-0.3
3,130,769	-				-0.3
3,130,801	-				+1.3
3,131,080	+		AO353_14080	0.52	-0.7
3,131,081	-		AO353_14080	0.52	-0.3
3,131,081	-		AO353_14080	0.52	-1.3
3,131,081	-		AO353_14080	0.52	-2.4
3,131,081	-		AO353_14080	0.52	+0.8