Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10490

Experiment: 1-ethyl-3-methylimidazolium lysine 10.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 10.5 mM
2,300,256	+				+2.1
2,300,256	+				-1.2
2,300,256	+				-1.0
2,300,256	+				-2.2
2,300,256	+				+1.0
2,300,256	+				-0.7
2,300,256	+				+0.1
2,300,256	+				+0.5
2,300,257	-				-0.8
2,300,257	-				-1.0
2,300,257	-				-0.9
2,300,257	-				+0.7
2,300,257	-				+0.3
2,300,257	-				+0.2
2,300,257	-				-0.0
2,300,257	-				-0.7
2,300,257	-				-1.0
2,300,257	-				-1.7
2,300,257	-				-1.5
2,300,264	+				-0.6
2,300,264	+				-1.3
2,300,265	-				+0.3
2,300,265	-				-0.8
2,300,276	+				+2.3
2,300,276	+				+1.1
2,300,276	+				-0.9
2,300,276	+				-3.3
2,300,276	+				+0.1
2,300,276	+				+1.1
2,300,276	+				-0.8
2,300,277	-				-2.8
2,300,277	-				+0.5
2,300,277	-				-1.5
2,300,277	-				-0.8
2,300,277	-				-0.4
2,300,295	+				+0.1
2,300,350	+				-0.0
2,300,351	-				-0.0
2,300,426	+				-0.5
2,300,426	+				-1.1
2,300,426	+				+2.1
2,300,426	+				+1.3
2,300,427	-				+1.5
2,300,443	+				+0.2
2,300,443	+				+1.1
2,300,458	+				-0.8
2,300,458	+				+0.5
2,300,458	+				+0.5
2,300,458	+				-1.5
2,300,458	+				-0.2
2,300,459	-				+0.5
2,300,459	-				+1.5
2,300,493	+				+0.8
2,300,494	-				+0.5
2,300,494	-				-0.2
2,300,494	-				-0.0
2,300,494	-				-0.5
2,300,494	-				-1.3
2,300,494	-				+0.3
2,300,581	+				+0.2
2,300,581	+				+0.4
2,300,581	+				+1.7
2,300,581	+				-0.5
2,300,581	+				+0.2
2,300,581	+				+1.0
2,300,581	+				-0.5
2,300,582	-				+0.9
2,300,582	-				+2.1
2,300,582	-				-0.8
2,300,582	-				-0.5
2,300,582	-				+0.5
2,300,582	-				-1.0
2,300,617	+				-1.5
2,300,617	+				-0.8
2,300,618	-				+0.1
2,300,618	-				+0.2
2,300,618	-				-1.0
2,300,722	+				+0.3
2,300,722	+				+1.0
2,300,723	-				+2.1
2,300,723	-				-1.0
2,300,723	-				-1.5
2,300,723	-				+1.1
2,300,723	-				-0.6
2,300,723	-				-0.6
2,300,763	+				-0.3
2,300,763	+				+0.5
2,300,763	+				-2.4
2,300,763	+				-0.5
2,300,764	-				+0.5
2,300,870	+		AO353_10490	0.11	+0.5
2,300,870	+		AO353_10490	0.11	+0.9
2,300,870	+		AO353_10490	0.11	+0.5
2,300,870	+		AO353_10490	0.11	-0.5
2,300,870	+		AO353_10490	0.11	+0.5
2,300,870	+		AO353_10490	0.11	+0.2
2,300,870	+				+1.0
2,300,870	+		AO353_10490	0.11	+0.2
2,300,870	+		AO353_10490	0.11	-1.6
2,300,870	+		AO353_10490	0.11	-0.3
2,300,870	+		AO353_10490	0.11	-0.8
2,300,870	+		AO353_10490	0.11	+1.8
2,300,870	+		AO353_10490	0.11	-0.4
2,300,870	+		AO353_10490	0.11	-0.3
2,300,871	-		AO353_10490	0.11	+0.2
2,300,871	-		AO353_10490	0.11	+0.3
2,300,871	-		AO353_10490	0.11	+0.2
2,300,871	-		AO353_10490	0.11	-0.5
2,300,871	-		AO353_10490	0.11	+0.3
2,300,871	-		AO353_10490	0.11	-0.9
2,300,871	-		AO353_10490	0.11	+0.7
2,300,871	-		AO353_10490	0.11	+0.5
2,300,871	-		AO353_10490	0.11	+0.7
2,300,871	-		AO353_10490	0.11	+0.3
2,300,871	-		AO353_10490	0.11	+1.0
2,300,871	-		AO353_10490	0.11	-1.1
2,300,896	+		AO353_10490	0.13	-0.0
2,300,896	+		AO353_10490	0.13	-0.3
2,300,896	+		AO353_10490	0.13	-0.9
2,300,897	-		AO353_10490	0.13	+1.3
2,300,897	-		AO353_10490	0.13	+1.0
2,300,897	-		AO353_10490	0.13	-0.1
2,300,907	+		AO353_10490	0.14	+0.4
2,300,907	+		AO353_10490	0.14	-0.0
2,300,907	+		AO353_10490	0.14	+1.0
2,300,907	+		AO353_10490	0.14	+1.5
2,300,908	-		AO353_10490	0.14	-0.8
2,300,908	-		AO353_10490	0.14	+1.5
2,300,908	-		AO353_10490	0.14	+0.5
2,300,908	-		AO353_10490	0.14	-2.5
2,300,908	-		AO353_10490	0.14	+0.9
2,300,908	-		AO353_10490	0.14	+0.9
2,300,908	-		AO353_10490	0.14	-0.0
2,300,923	+		AO353_10490	0.15	+0.4
2,301,012	+		AO353_10490	0.23	-0.0
2,301,012	+		AO353_10490	0.23	-0.6
2,301,012	+		AO353_10490	0.23	+0.2
2,301,012	+		AO353_10490	0.23	+0.5
2,301,012	+		AO353_10490	0.23	+1.3
2,301,013	-		AO353_10490	0.23	-0.3
2,301,013	-		AO353_10490	0.23	+0.2
2,301,013	-		AO353_10490	0.23	+1.0
2,301,057	+		AO353_10490	0.27	-1.0
2,301,058	-		AO353_10490	0.27	-1.5
2,301,070	+		AO353_10490	0.28	-1.0
2,301,070	+		AO353_10490	0.28	-0.8
2,301,070	+		AO353_10490	0.28	+1.1
2,301,070	+		AO353_10490	0.28	+0.7
2,301,070	+		AO353_10490	0.28	-0.3
2,301,070	+		AO353_10490	0.28	-0.0
2,301,070	+		AO353_10490	0.28	+1.7
2,301,070	+		AO353_10490	0.28	-1.5
2,301,070	+		AO353_10490	0.28	+1.5
2,301,070	+		AO353_10490	0.28	-0.9
2,301,070	+		AO353_10490	0.28	+1.0
2,301,071	-		AO353_10490	0.28	+1.2
2,301,071	-		AO353_10490	0.28	-0.3
2,301,071	-		AO353_10490	0.28	-0.3
2,301,071	-		AO353_10490	0.28	+0.5
2,301,106	+		AO353_10490	0.31	-0.8
2,301,106	+		AO353_10490	0.31	-0.0
2,301,106	+		AO353_10490	0.31	+2.5
2,301,106	+		AO353_10490	0.31	-0.6
2,301,106	+		AO353_10490	0.31	-1.5
2,301,107	-		AO353_10490	0.31	+1.2
2,301,107	-		AO353_10490	0.31	-1.4
2,301,107	-		AO353_10490	0.31	+1.0
2,301,109	+		AO353_10490	0.32	-0.8
2,301,109	+		AO353_10490	0.32	+1.3
2,301,109	+		AO353_10490	0.32	+0.3
2,301,109	+		AO353_10490	0.32	+1.0
2,301,109	+		AO353_10490	0.32	+2.0
2,301,109	+		AO353_10490	0.32	-0.4
2,301,110	-		AO353_10490	0.32	-0.8
2,301,110	-		AO353_10490	0.32	+1.3
2,301,110	-		AO353_10490	0.32	-0.7
2,301,110	-		AO353_10490	0.32	-1.5
2,301,113	+		AO353_10490	0.32	+1.0
2,301,113	+		AO353_10490	0.32	-0.7
2,301,113	+		AO353_10490	0.32	-0.5
2,301,113	+		AO353_10490	0.32	-0.0
2,301,113	+		AO353_10490	0.32	-1.8
2,301,114	-		AO353_10490	0.32	+1.5
2,301,194	+		AO353_10490	0.39	+0.2
2,301,194	+		AO353_10490	0.39	+2.9
2,301,194	+		AO353_10490	0.39	+0.6
2,301,194	+		AO353_10490	0.39	-0.0
2,301,194	+		AO353_10490	0.39	-0.6
2,301,194	+		AO353_10490	0.39	+0.5
2,301,194	+		AO353_10490	0.39	-0.6
2,301,194	+		AO353_10490	0.39	+0.1
2,301,194	+		AO353_10490	0.39	+0.5
2,301,194	+		AO353_10490	0.39	+1.5
2,301,194	+		AO353_10490	0.39	+1.7
2,301,195	-		AO353_10490	0.39	-1.5
2,301,195	-		AO353_10490	0.39	+0.5
2,301,195	-		AO353_10490	0.39	-0.9
2,301,195	-		AO353_10490	0.39	+1.8
2,301,195	-		AO353_10490	0.39	-0.8
2,301,195	-		AO353_10490	0.39	+1.1
2,301,195	-		AO353_10490	0.39	-1.5
2,301,195	-		AO353_10490	0.39	-1.0
2,301,195	-		AO353_10490	0.39	+0.5
2,301,195	-		AO353_10490	0.39	-0.5
2,301,195	-		AO353_10490	0.39	+0.8
2,301,199	+		AO353_10490	0.39	-0.0
2,301,199	+		AO353_10490	0.39	+1.2
2,301,199	+		AO353_10490	0.39	-0.0
2,301,199	+		AO353_10490	0.39	+0.2
2,301,199	+		AO353_10490	0.39	-0.5
2,301,199	+		AO353_10490	0.39	+1.1
2,301,199	+		AO353_10490	0.39	+0.8
2,301,199	+		AO353_10490	0.39	+0.6
2,301,200	-		AO353_10490	0.40	+0.9
2,301,200	-		AO353_10490	0.40	+1.0
2,301,200	-		AO353_10490	0.40	+0.1
2,301,200	-		AO353_10490	0.40	+0.7
2,301,200	-		AO353_10490	0.40	-1.0
2,301,200	-		AO353_10490	0.40	+0.5
2,301,296	+		AO353_10490	0.48	-1.5
2,301,296	+		AO353_10490	0.48	-0.8
2,301,296	+		AO353_10490	0.48	-0.0
2,301,297	-		AO353_10490	0.48	-0.7
2,301,463	+		AO353_10490	0.63	+1.3
2,301,463	+		AO353_10490	0.63	+0.3
2,301,463	+		AO353_10490	0.63	+0.8
2,301,463	+		AO353_10490	0.63	+1.0
2,301,463	+		AO353_10490	0.63	+0.2
2,301,463	+		AO353_10490	0.63	+0.8
2,301,463	+		AO353_10490	0.63	-0.0
2,301,463	+		AO353_10490	0.63	-0.0
2,301,464	-		AO353_10490	0.63	-0.9
2,301,464	-		AO353_10490	0.63	-0.5
2,301,464	-		AO353_10490	0.63	-0.2
2,301,464	-		AO353_10490	0.63	-0.3
2,301,477	-		AO353_10490	0.64	-0.6
2,301,496	-		AO353_10490	0.65	-0.7
2,301,499	+		AO353_10490	0.66	-0.8
2,301,499	+		AO353_10490	0.66	-1.5
2,301,499	+		AO353_10490	0.66	-0.5
2,301,499	+		AO353_10490	0.66	-0.9
2,301,499	+		AO353_10490	0.66	+0.7
2,301,499	+		AO353_10490	0.66	-0.3
2,301,500	-		AO353_10490	0.66	-0.9
2,301,500	-		AO353_10490	0.66	+0.5
2,301,500	-		AO353_10490	0.66	-0.5
2,301,500	-		AO353_10490	0.66	+1.3
2,301,500	-		AO353_10490	0.66	-0.7
2,301,500	-		AO353_10490	0.66	+0.7
2,301,500	-		AO353_10490	0.66	-0.5
2,301,552	+		AO353_10490	0.70	-0.7
2,301,552	+		AO353_10490	0.70	-0.3
2,301,552	+		AO353_10490	0.70	-0.7
2,301,552	+		AO353_10490	0.70	+1.2
2,301,553	-		AO353_10490	0.70	-1.5
2,301,553	-		AO353_10490	0.70	-0.4
2,301,553	-		AO353_10490	0.70	+0.1
2,301,751	+		AO353_10490	0.88	-0.7
2,301,751	+		AO353_10490	0.88	-0.6
2,301,752	-		AO353_10490	0.88	-0.5
2,301,752	-		AO353_10490	0.88	+1.2
2,301,752	-		AO353_10490	0.88	-0.0
2,301,752	-		AO353_10490	0.88	-1.8
2,301,752	-		AO353_10490	0.88	+0.3
2,301,774	+		AO353_10490	0.90	-1.0
2,301,775	-		AO353_10490	0.90	+0.1
2,301,775	-		AO353_10490	0.90	-0.0
2,301,775	-		AO353_10490	0.90	-0.8
2,301,785	+				-0.8
2,301,785	+				+0.1
2,301,785	+				-1.6
2,301,786	-				+0.1
2,301,797	+				-0.2
2,301,797	+				-0.5
2,301,797	+				+0.5
2,301,798	-				-0.7
2,301,798	-				+1.5
2,301,798	-				-1.6
2,301,798	-				-0.5
2,301,883	+				+1.5
2,301,884	-				+1.1
2,301,884	-				+0.1
2,301,884	-				-2.2
2,301,908	+				-0.5
2,301,908	+				-0.4
2,301,908	+				-0.7
2,301,908	+				-0.0
2,301,908	+				+0.5
2,301,908	+				-0.3
2,301,908	+				-1.8
2,301,908	+				-0.8
2,301,908	+				+0.0
2,301,908	+				-0.5
2,301,908	+				+1.5
2,301,908	+				+0.2
2,301,909	-				+0.3
2,301,909	-				+0.7
2,301,909	-				+0.2
2,301,909	-				-0.9
2,301,909	-				+2.0
2,301,909	-				+0.3
2,301,909	-				+1.5
2,301,909	-				-1.8
2,301,909	-				-0.8
2,301,909	-				+0.7
2,301,909	-				-2.6
2,301,909	-				-0.2
2,301,909	-				-0.8
2,301,909	-				+1.0
2,301,909	-				+1.1
2,301,909	-				-0.2
2,301,909	-				-1.3
2,301,909	-				-0.0
2,301,909	-				-0.5
2,301,909	-				-0.5
2,301,909	-				+0.5
2,301,910	+				+0.4
2,301,910	+				-1.0
2,301,910	+				-1.5
2,301,910	+				+0.9
2,301,910	+				-2.5
2,301,910	+				+0.7
2,301,910	+				-2.3
2,301,910	+				+1.5
2,301,910	+				+1.0
2,301,910	+				-1.8
2,301,910	+				-0.3
2,301,910	+				+0.4
2,301,910	+				-1.3
2,301,910	+				-0.5
2,301,910	+				-0.6
2,301,910	+				+2.1
2,301,910	+				+1.4
2,301,910	+				-0.6
2,301,910	+				+1.7
2,301,910	+				+0.4
2,301,911	-				-0.0
2,301,911	-				-0.6
2,301,911	-				+0.2
2,301,911	-				-0.8
2,301,911	-				-1.5
2,301,911	-				-1.8
2,301,911	-				-0.5
2,301,911	-				+1.2
2,301,911	-				+0.5
2,301,911	-				-0.0
2,301,911	-				-1.3
2,301,911	-				+0.5
2,301,911	-				+1.0
2,301,911	-				+0.3
2,301,911	-				+0.4
2,301,911	-				+0.3
2,301,911	-				-0.8
2,301,911	-				-0.5
2,301,911	-				-1.0
2,301,911	-				-0.4
2,301,911	-				-0.0
2,301,912	+				-0.0
2,301,912	+				+0.5
2,301,912	+				-1.0
2,301,912	+				+0.2
2,301,912	+				-3.1
2,301,912	+				-0.5
2,301,912	+				-1.6
2,301,912	+				+1.9
2,301,912	+				+0.3
2,301,912	+				+0.4
2,301,912	+				-1.0
2,301,912	+				-1.8
2,301,913	-				+0.5
2,301,913	-				+0.8
2,301,913	-				-0.7
2,301,913	-				-0.5
2,301,913	-				+1.2
2,301,913	-				-0.3
2,301,913	-				-0.3
2,301,913	-				-1.3
2,301,913	-				+1.7
2,301,913	-				-0.8
2,301,913	-				-0.9
2,301,913	-				+0.5
2,301,913	-				-1.4
2,301,913	-				-0.0
2,301,913	-				-0.5
2,301,913	-				+0.5
2,301,913	-				-0.5
2,301,913	-				+0.7
2,301,913	-				+1.5
2,301,924	+				-0.5
2,301,942	+				-0.6
2,301,943	-				-1.9
2,301,943	-				+0.2
2,301,943	-				-1.8
2,301,963	+				-0.0
2,301,963	+				+2.3
2,301,963	+				+1.5
2,301,963	+				-0.5
2,301,964	-				+2.5
2,301,964	-				-0.5
2,302,026	-				+0.2
2,302,028	+				+1.5
2,302,028	+				-1.1
2,302,028	+				+0.5
2,302,029	-				+0.2
2,302,029	-				-0.8
2,302,029	-				+0.5
2,302,029	-				+0.1
2,302,029	-				-1.6
2,302,029	-				-0.2
2,302,029	-				-0.5
2,302,029	-				-1.3
2,302,132	+				-1.5
2,302,132	+				-1.3
2,302,133	-				-1.3
2,302,381	+		AO353_10495	0.19	+0.9
2,302,382	-		AO353_10495	0.19	-0.6
2,302,382	-		AO353_10495	0.19	+0.5
2,302,420	+		AO353_10495	0.22	+1.5
2,302,420	+		AO353_10495	0.22	+0.3
2,302,544	-		AO353_10495	0.32	+0.5
2,302,733	+		AO353_10495	0.47	+1.3
2,302,733	+		AO353_10495	0.47	+0.5
2,302,873	+		AO353_10495	0.58	-1.5