Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09900

Experiment: 1-ethyl-3-methylimidazolium lysine 10.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 10.5 mM
2,160,262	-		AO353_09895	0.41	-1.0
2,160,394	+		AO353_09895	0.49	+0.9
2,160,395	-		AO353_09895	0.49	-0.2
2,160,395	-		AO353_09895	0.49	-0.7
2,160,395	-		AO353_09895	0.49	-0.9
2,160,395	-		AO353_09895	0.49	+0.1
2,160,415	+		AO353_09895	0.51	+0.1
2,160,415	+		AO353_09895	0.51	-0.4
2,160,415	+		AO353_09895	0.51	-1.1
2,160,415	+		AO353_09895	0.51	+2.8
2,160,416	-		AO353_09895	0.51	-1.0
2,160,416	-		AO353_09895	0.51	-0.8
2,160,416	-		AO353_09895	0.51	-0.5
2,160,437	-		AO353_09895	0.52	+0.9
2,160,554	+		AO353_09895	0.59	+1.0
2,160,554	+		AO353_09895	0.59	-0.1
2,160,554	+		AO353_09895	0.59	+0.8
2,160,554	+		AO353_09895	0.59	-1.4
2,160,555	-		AO353_09895	0.59	-1.7
2,160,555	-		AO353_09895	0.59	+1.1
2,160,555	-		AO353_09895	0.59	+0.5
2,160,555	-		AO353_09895	0.59	+0.5
2,160,555	-		AO353_09895	0.59	-1.8
2,160,555	-		AO353_09895	0.59	+0.9
2,160,557	-		AO353_09895	0.59	-0.7
2,160,818	-		AO353_09895	0.75	-0.4
2,160,818	-		AO353_09895	0.75	-0.1
2,161,075	+				+0.9
2,161,075	+				-0.6
2,161,076	-				-0.2
2,161,076	-				+0.3
2,161,076	-				-0.7
2,161,076	-				-1.5
2,161,076	-				+0.5
2,161,076	-				+1.2
2,161,076	-				-1.6
2,161,249	+				+1.5
2,161,249	+				+0.5
2,161,249	+				-0.3
2,161,250	-				-1.0
2,161,250	-				-0.1
2,161,250	-				-0.8
2,161,250	-				-1.1
2,161,250	-				-0.8
2,161,250	-				-1.4
2,161,250	-				+1.5
2,161,250	-				+1.8
2,161,258	+				+0.2
2,161,258	+				+1.2
2,161,258	+				-0.3
2,161,259	-				-0.3
2,161,270	+				-1.0
2,161,270	+				+0.5
2,161,271	-				+2.1
2,161,639	-		AO353_09900	0.17	-0.7
2,161,660	+		AO353_09900	0.18	+0.9
2,161,660	+		AO353_09900	0.18	+1.5
2,161,661	-		AO353_09900	0.18	+0.0
2,161,723	+		AO353_09900	0.20	-0.1
2,161,724	-		AO353_09900	0.20	-0.8
2,161,724	-		AO353_09900	0.20	-0.5
2,161,724	-		AO353_09900	0.20	+0.7
2,161,724	-		AO353_09900	0.20	+1.5
2,161,724	-		AO353_09900	0.20	+1.1
2,161,790	-		AO353_09900	0.23	+0.4
2,161,790	-		AO353_09900	0.23	+0.5
2,161,790	-		AO353_09900	0.23	+2.5
2,161,790	-		AO353_09900	0.23	-0.6
2,161,978	+		AO353_09900	0.32	+2.5
2,161,978	+		AO353_09900	0.32	+0.2
2,161,979	-		AO353_09900	0.32	+0.2
2,162,086	+		AO353_09900	0.36	-0.8
2,162,086	+		AO353_09900	0.36	+1.5
2,162,087	-		AO353_09900	0.36	+0.7
2,162,087	-		AO353_09900	0.36	+0.8
2,162,087	-		AO353_09900	0.36	-0.6
2,162,087	-		AO353_09900	0.36	-0.1
2,162,087	-		AO353_09900	0.36	-0.8
2,162,087	-		AO353_09900	0.36	+1.9
2,162,087	-		AO353_09900	0.36	-0.1
2,162,087	-		AO353_09900	0.36	-0.8
2,162,096	-		AO353_09900	0.37	-0.1
2,162,096	-		AO353_09900	0.37	+1.6
2,162,096	-		AO353_09900	0.37	-0.9
2,162,096	-		AO353_09900	0.37	+0.1
2,162,096	-		AO353_09900	0.37	-0.3
2,162,141	-		AO353_09900	0.39	+0.6
2,162,141	-		AO353_09900	0.39	-0.7
2,162,141	-		AO353_09900	0.39	+1.1
2,162,230	+		AO353_09900	0.43	-0.3
2,162,230	+		AO353_09900	0.43	-1.1
2,162,230	+		AO353_09900	0.43	+0.4
2,162,230	+		AO353_09900	0.43	+1.0
2,162,230	+		AO353_09900	0.43	-1.3
2,162,230	+		AO353_09900	0.43	+1.6
2,162,231	-		AO353_09900	0.43	-0.1
2,162,231	-		AO353_09900	0.43	-1.2
2,162,231	-		AO353_09900	0.43	-0.3
2,162,231	-		AO353_09900	0.43	+1.2
2,162,231	-		AO353_09900	0.43	-0.8
2,162,231	-		AO353_09900	0.43	+0.2
2,162,231	-		AO353_09900	0.43	+2.3
2,162,231	-		AO353_09900	0.43	-0.5
2,162,231	-		AO353_09900	0.43	+0.7
2,162,231	-		AO353_09900	0.43	+2.0
2,162,231	-		AO353_09900	0.43	+1.3
2,162,231	-		AO353_09900	0.43	-0.5
2,162,231	-		AO353_09900	0.43	+0.6
2,162,231	-		AO353_09900	0.43	+0.4
2,162,235	-		AO353_09900	0.43	-0.7
2,162,235	-		AO353_09900	0.43	-0.4
2,162,235	-		AO353_09900	0.43	-0.0
2,162,245	+		AO353_09900	0.43	+1.5
2,162,245	+		AO353_09900	0.43	+1.5
2,162,245	+		AO353_09900	0.43	+0.8
2,162,246	-		AO353_09900	0.43	-1.1
2,162,246	-		AO353_09900	0.43	+1.8
2,162,246	-		AO353_09900	0.43	+0.3
2,162,246	-		AO353_09900	0.43	+1.1
2,162,255	-		AO353_09900	0.44	+0.5
2,162,684	-		AO353_09900	0.63	+0.9
2,162,749	+		AO353_09900	0.65	-0.8
2,162,749	+		AO353_09900	0.65	+5.1
2,162,750	-		AO353_09900	0.65	+0.2
2,162,750	-		AO353_09900	0.65	-0.1
2,162,750	-		AO353_09900	0.65	+0.3
2,162,750	-		AO353_09900	0.65	-0.1
2,162,750	-		AO353_09900	0.65	-0.7
2,163,047	+		AO353_09900	0.78	+1.7
2,163,048	-		AO353_09900	0.78	+0.2
2,163,048	-		AO353_09900	0.78	+1.5
2,163,048	-		AO353_09900	0.78	+0.2
2,163,049	+		AO353_09900	0.78	+0.8
2,163,049	+		AO353_09900	0.78	-1.1
2,163,049	+		AO353_09900	0.78	+0.2
2,163,050	-		AO353_09900	0.79	+0.6
2,163,050	-		AO353_09900	0.79	+1.9
2,163,050	-		AO353_09900	0.79	-0.1
2,163,050	-		AO353_09900	0.79	+1.5
2,163,050	-		AO353_09900	0.79	-0.8
2,163,050	-		AO353_09900	0.79	+0.1
2,163,050	-		AO353_09900	0.79	+0.5
2,163,050	-		AO353_09900	0.79	+1.2
2,163,175	-		AO353_09900	0.84	-0.1
2,163,175	-		AO353_09900	0.84	+1.9
2,163,355	+				-1.0
2,163,355	+				+1.2
2,163,355	+				+0.0
2,163,356	-				+0.3
2,163,356	-				+1.5
2,163,394	-				+0.8
2,163,419	-				-2.0
2,163,479	+				+0.5
2,163,479	+				+0.7
2,163,510	-				-0.1
2,163,551	-				-0.8
2,163,561	+				+1.5
2,163,561	+				-0.5
2,163,561	+				+0.5
2,163,562	-				+1.1
2,163,562	-				+0.9
2,163,643	+				+1.2
2,163,644	-				+0.7
2,163,648	-				-1.1
2,163,659	+				+0.9
2,163,659	+				+1.5
2,163,659	+				+2.4
2,163,660	-				+0.8
2,163,660	-				+0.8
2,163,660	-				+0.4
2,163,744	+				-0.5
2,163,770	+				-0.3
2,163,771	-				-0.7
2,163,862	+				+0.1
2,163,862	+				-0.5
2,163,863	-				-0.1
2,163,863	-				-1.1
2,163,863	-				+1.0
2,163,964	+		AO353_09905	0.19	-1.1
2,163,964	+		AO353_09905	0.19	-1.1
2,163,965	-		AO353_09905	0.19	+1.5
2,163,965	-		AO353_09905	0.19	+0.7
2,163,965	-		AO353_09905	0.19	-0.6
2,163,970	+		AO353_09905	0.19	+0.7
2,163,971	-		AO353_09905	0.19	+0.3
2,163,991	+		AO353_09905	0.21	-0.8
2,163,991	+		AO353_09905	0.21	-0.1
2,163,992	-		AO353_09905	0.21	-0.3
2,164,030	+		AO353_09905	0.25	+0.8
2,164,030	+		AO353_09905	0.25	-1.4
2,164,030	+		AO353_09905	0.25	-0.5
2,164,030	+		AO353_09905	0.25	-1.0
2,164,031	-		AO353_09905	0.25	+0.9
2,164,031	-		AO353_09905	0.25	-0.4
2,164,031	-		AO353_09905	0.25	-1.1
2,164,085	-		AO353_09905	0.31	-1.6
2,164,177	+		AO353_09905	0.40	-1.7
2,164,177	+		AO353_09905	0.40	+1.2
2,164,177	+		AO353_09905	0.40	+0.5
2,164,178	-		AO353_09905	0.40	+0.4
2,164,178	-		AO353_09905	0.40	-1.1
2,164,178	-		AO353_09905	0.40	+1.8
2,164,178	-		AO353_09905	0.40	-0.8
2,164,178	-		AO353_09905	0.40	+0.3
2,164,210	+		AO353_09905	0.43	+0.9
2,164,211	-		AO353_09905	0.43	-2.3
2,164,216	+		AO353_09905	0.44	+0.2
2,164,216	+		AO353_09905	0.44	+0.6
2,164,216	+		AO353_09905	0.44	-1.5
2,164,217	-		AO353_09905	0.44	-0.2
2,164,217	-		AO353_09905	0.44	-1.2
2,164,217	-		AO353_09905	0.44	+0.3
2,164,217	-		AO353_09905	0.44	-0.4
2,164,217	-		AO353_09905	0.44	+0.2
2,164,236	-		AO353_09905	0.46	-1.3
2,164,442	-		AO353_09905	0.66	+1.0
2,164,442	-		AO353_09905	0.66	-0.1
2,164,447	+		AO353_09905	0.67	-1.8
2,164,447	+		AO353_09905	0.67	+1.8
2,164,447	+		AO353_09905	0.67	-1.5
2,164,448	-		AO353_09905	0.67	+3.1
2,164,448	-		AO353_09905	0.67	-0.2
2,164,448	-		AO353_09905	0.67	+1.1