Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08100

Experiment: 1-ethyl-3-methylimidazolium lysine 10.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 10.5 mM
1,788,878	+				+0.9
1,788,878	+				-1.3
1,788,878	+				+0.7
1,788,878	+				-0.6
1,788,878	+				+1.4
1,788,878	+				+0.4
1,788,878	+				+0.4
1,788,878	+				-0.3
1,788,878	+				-1.3
1,788,878	+				+0.6
1,788,879	-				-0.8
1,788,879	-				-0.3
1,788,879	-				+1.4
1,788,879	-				-0.2
1,788,879	-				-0.7
1,788,879	-				+0.4
1,788,879	-				-3.1
1,788,890	+				-1.5
1,788,891	-				-1.4
1,788,903	+				+0.1
1,788,911	+				-0.2
1,788,911	+				-0.6
1,788,912	-				-0.3
1,789,000	-				+0.9
1,789,011	+				-1.2
1,789,011	+				-1.9
1,789,011	+				+0.2
1,789,011	+				+1.4
1,789,011	+				+1.7
1,789,011	+				+0.8
1,789,012	-				-1.1
1,789,012	-				+0.7
1,789,012	-				+1.3
1,789,012	-				-0.9
1,789,012	-				-0.6
1,789,021	+				+0.1
1,789,021	+				+1.0
1,789,022	-				-0.5
1,789,022	-				-2.4
1,789,022	-				-0.5
1,789,022	-				+1.1
1,789,038	+				-0.0
1,789,038	+				+0.7
1,789,095	+				+0.2
1,789,095	+				-0.2
1,789,096	-				+0.8
1,789,182	+				+0.3
1,789,182	+				-0.2
1,789,183	-				-0.7
1,789,191	-				-1.1
1,789,222	+				+0.4
1,789,222	+				-0.2
1,789,222	+				-1.1
1,789,222	+				+1.1
1,789,222	+				+0.4
1,789,222	+				+1.4
1,789,222	+				+0.8
1,789,222	+				+0.2
1,789,222	+				-1.3
1,789,222	+				-0.8
1,789,222	+				-0.2
1,789,222	+				-0.0
1,789,222	+				-1.2
1,789,223	-				-0.2
1,789,223	-				+0.3
1,789,223	-				+1.3
1,789,223	-				-2.8
1,789,304	-		AO353_08095	0.17	+0.3
1,789,304	-		AO353_08095	0.17	-1.6
1,789,419	+		AO353_08095	0.38	+0.5
1,789,419	+		AO353_08095	0.38	+0.3
1,789,419	+		AO353_08095	0.38	-1.9
1,789,420	-		AO353_08095	0.38	+0.1
1,789,420	-		AO353_08095	0.38	-1.2
1,789,420	-		AO353_08095	0.38	-0.0
1,789,420	-		AO353_08095	0.38	-2.3
1,789,420	-		AO353_08095	0.38	-0.6
1,789,420	-		AO353_08095	0.38	+1.4
1,789,420	-		AO353_08095	0.38	+0.8
1,789,420	-		AO353_08095	0.38	+0.4
1,789,420	-		AO353_08095	0.38	-0.6
1,789,420	-		AO353_08095	0.38	+0.4
1,789,420	-		AO353_08095	0.38	+1.7
1,789,421	+		AO353_08095	0.39	+0.3
1,789,422	-		AO353_08095	0.39	+1.0
1,789,422	-		AO353_08095	0.39	+1.4
1,789,436	-		AO353_08095	0.41	-0.8
1,789,486	+		AO353_08095	0.51	+0.3
1,789,486	+		AO353_08095	0.51	+0.4
1,789,486	+		AO353_08095	0.51	-0.3
1,789,486	+		AO353_08095	0.51	+0.5
1,789,486	+		AO353_08095	0.51	+0.3
1,789,486	+		AO353_08095	0.51	+0.4
1,789,486	+		AO353_08095	0.51	-1.8
1,789,486	+		AO353_08095	0.51	-0.4
1,789,487	-		AO353_08095	0.51	+0.9
1,789,487	-		AO353_08095	0.51	-1.3
1,789,487	-		AO353_08095	0.51	+0.7
1,789,487	-		AO353_08095	0.51	+0.3
1,789,487	-		AO353_08095	0.51	-1.8
1,789,613	+		AO353_08095	0.74	+1.1
1,789,613	+		AO353_08095	0.74	+1.1
1,789,613	+		AO353_08095	0.74	-0.6
1,789,613	+		AO353_08095	0.74	+0.8
1,789,614	-		AO353_08095	0.74	-0.0
1,789,827	+		AO353_08100	0.17	+1.4
1,789,827	+		AO353_08100	0.17	+0.7
1,789,827	+		AO353_08100	0.17	-1.4
1,789,828	-		AO353_08100	0.18	-0.8
1,789,828	-		AO353_08100	0.18	-0.8
1,789,828	-		AO353_08100	0.18	-0.2
1,790,085	+		AO353_08100	0.88	-1.2
1,790,085	+		AO353_08100	0.88	-1.2
1,790,086	-		AO353_08100	0.88	-1.2
1,790,086	-		AO353_08100	0.88	-0.8
1,790,119	+				-0.5
1,790,119	+				-0.5
1,790,119	+				-0.6
1,790,119	+				+0.6
1,790,120	-				+0.8
1,790,120	-				-1.2
1,790,120	-				-0.2
1,790,120	-				-0.6
1,790,120	-				-1.1
1,790,146	+				-1.4
1,790,146	+				+0.4
1,790,146	+				+0.4
1,790,147	-				-0.5
1,790,147	-				+2.7
1,790,147	-				+0.4
1,790,187	+				+1.9
1,790,188	-				-1.2
1,790,188	-				-0.0
1,790,216	+				-1.3
1,790,217	-				+0.4
1,790,335	+		AO353_08105	0.37	-0.3
1,790,335	+		AO353_08105	0.37	-1.2
1,790,336	-		AO353_08105	0.37	+0.5
1,790,336	-		AO353_08105	0.37	+0.1
1,790,336	-		AO353_08105	0.37	-0.6
1,790,336	-		AO353_08105	0.37	+1.0
1,790,336	-		AO353_08105	0.37	-1.1
1,790,336	-		AO353_08105	0.37	-1.4
1,790,336	-		AO353_08105	0.37	+0.8
1,790,336	-		AO353_08105	0.37	+0.0
1,790,336	-		AO353_08105	0.37	+0.8
1,790,501	+		AO353_08105	0.78	-0.2
1,790,501	+		AO353_08105	0.78	+2.1
1,790,501	+		AO353_08105	0.78	-2.3
1,790,501	+		AO353_08105	0.78	+2.4
1,790,501	+		AO353_08105	0.78	-2.4
1,790,502	-		AO353_08105	0.78	+0.4
1,790,502	-		AO353_08105	0.78	+0.4
1,790,502	-		AO353_08105	0.78	-0.6
1,790,502	-		AO353_08105	0.78	-0.0
1,790,590	+				+2.4
1,790,590	+				+0.7
1,790,590	+				+1.4
1,790,599	+				-0.7
1,790,599	+				-0.9
1,790,599	+				+0.8
1,790,600	-				+2.2
1,790,600	-				+0.7
1,790,693	+				-0.4
1,790,693	+				-1.2
1,790,693	+				+0.4
1,790,693	+				-0.6
1,790,694	-				-0.4
1,790,716	+				+0.4
1,790,716	+				-0.1
1,790,716	+				-0.3
1,790,716	+				-0.9
1,790,716	+				-0.6
1,790,716	+				-0.0
1,790,716	+				+1.0
1,790,716	+				-1.6
1,790,717	-				+0.1
1,790,717	-				+0.9
1,790,717	-				+1.4
1,790,873	+				-1.4
1,790,873	+				-0.8
1,790,874	-				-0.0
1,790,876	-				-0.4
1,790,876	-				-0.8
1,790,876	-				-1.6
1,790,884	+				-0.9
1,790,936	+		AO353_08110	0.12	+0.4
1,790,936	+		AO353_08110	0.12	+0.2
1,790,936	+		AO353_08110	0.12	-1.8
1,790,936	+		AO353_08110	0.12	-1.6
1,790,936	+		AO353_08110	0.12	-1.2
1,790,936	+		AO353_08110	0.12	-0.2
1,790,936	+		AO353_08110	0.12	+0.1
1,790,936	+		AO353_08110	0.12	-0.6
1,790,937	-		AO353_08110	0.12	-1.8
1,790,937	-		AO353_08110	0.12	+0.6
1,790,937	-		AO353_08110	0.12	-0.2
1,790,937	-		AO353_08110	0.12	-0.2
1,790,937	-		AO353_08110	0.12	+0.2
1,790,937	-		AO353_08110	0.12	-0.2
1,790,937	-		AO353_08110	0.12	-1.6
1,790,937	-		AO353_08110	0.12	-0.4
1,790,937	-		AO353_08110	0.12	-0.2
1,790,937	-		AO353_08110	0.12	-0.6
1,790,937	-		AO353_08110	0.12	+0.7
1,790,938	+		AO353_08110	0.12	-1.0
1,790,957	+		AO353_08110	0.14	-0.9
1,790,957	+		AO353_08110	0.14	-1.2
1,791,117	-		AO353_08110	0.31	+1.4
1,791,125	+		AO353_08110	0.31	+0.4
1,791,125	+		AO353_08110	0.31	-0.2
1,791,125	+		AO353_08110	0.31	+1.0
1,791,126	-		AO353_08110	0.32	+0.4
1,791,126	-		AO353_08110	0.32	-0.2
1,791,126	-		AO353_08110	0.32	-2.5