Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06585

Experiment: 1-ethyl-3-methylimidazolium lysine 10.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 10.5 mM
1,465,188	+				-1.1
1,465,188	+				+2.4
1,465,189	-				-0.7
1,465,203	+				+1.3
1,465,204	-				-0.3
1,465,221	-				+0.4
1,465,221	-				+0.5
1,465,248	-				+0.4
1,465,325	-				-0.7
1,465,347	-				-1.7
1,465,347	-				+2.8
1,465,350	+				+0.5
1,465,350	+				-1.5
1,465,350	+				+0.1
1,465,350	+				+1.0
1,465,350	+				-0.6
1,465,350	+				-0.0
1,465,351	-				+0.5
1,465,351	-				-0.4
1,465,351	-				+1.0
1,465,351	-				-1.2
1,465,351	-				+1.7
1,465,368	+				-1.0
1,465,368	+				+0.9
1,465,369	-				+0.3
1,465,369	-				-1.3
1,465,369	-				-0.3
1,465,369	-				-0.7
1,465,369	-				-2.4
1,465,381	-				+0.0
1,465,381	-				+0.1
1,465,432	+		AO353_06580	0.13	+0.3
1,465,432	+		AO353_06580	0.13	-0.7
1,465,432	+		AO353_06580	0.13	+1.6
1,465,445	-		AO353_06580	0.16	-0.0
1,465,519	+		AO353_06580	0.32	+0.2
1,465,519	+		AO353_06580	0.32	+0.1
1,465,519	+		AO353_06580	0.32	+0.3
1,465,519	+		AO353_06580	0.32	-1.5
1,465,519	+		AO353_06580	0.32	+2.0
1,465,519	+		AO353_06580	0.32	-0.7
1,465,519	+		AO353_06580	0.32	-0.2
1,465,519	+		AO353_06580	0.32	+0.2
1,465,519	+		AO353_06580	0.32	-0.0
1,465,519	+		AO353_06580	0.32	+1.6
1,465,520	-		AO353_06580	0.32	-1.4
1,465,520	-		AO353_06580	0.32	-0.1
1,465,520	-		AO353_06580	0.32	+1.9
1,465,520	-		AO353_06580	0.32	-0.3
1,465,520	-		AO353_06580	0.32	-1.9
1,465,520	-		AO353_06580	0.32	-0.7
1,465,573	+		AO353_06580	0.44	-1.3
1,465,627	+		AO353_06580	0.55	+1.3
1,465,627	+		AO353_06580	0.55	+1.9
1,465,627	+		AO353_06580	0.55	+1.3
1,465,627	+		AO353_06580	0.55	-1.4
1,465,627	+		AO353_06580	0.55	+0.8
1,465,627	+		AO353_06580	0.55	-0.3
1,465,627	+		AO353_06580	0.55	-1.9
1,465,627	+		AO353_06580	0.55	-1.0
1,465,627	+		AO353_06580	0.55	+0.8
1,465,627	+		AO353_06580	0.55	-0.3
1,465,627	+		AO353_06580	0.55	+1.3
1,465,627	+		AO353_06580	0.55	-1.0
1,465,627	+		AO353_06580	0.55	+0.7
1,465,627	+		AO353_06580	0.55	-1.4
1,465,627	+		AO353_06580	0.55	+0.5
1,465,628	-		AO353_06580	0.55	-0.0
1,465,628	-		AO353_06580	0.55	-1.4
1,465,628	-		AO353_06580	0.55	+0.6
1,465,628	-		AO353_06580	0.55	+0.7
1,465,628	-		AO353_06580	0.55	+0.6
1,465,628	-		AO353_06580	0.55	+0.7
1,465,628	-		AO353_06580	0.55	+0.9
1,465,628	-		AO353_06580	0.55	+0.8
1,465,628	-		AO353_06580	0.55	+0.1
1,465,628	-		AO353_06580	0.55	+0.3
1,465,628	-		AO353_06580	0.55	+0.3
1,465,628	-		AO353_06580	0.55	-0.5
1,465,628	-		AO353_06580	0.55	-2.0
1,465,628	-		AO353_06580	0.55	-0.6
1,465,628	-		AO353_06580	0.55	-0.6
1,465,628	-		AO353_06580	0.55	+0.3
1,465,628	-		AO353_06580	0.55	-0.7
1,465,628	-		AO353_06580	0.55	-0.5
1,465,628	-		AO353_06580	0.55	+0.3
1,465,628	-		AO353_06580	0.55	+0.3
1,465,628	-		AO353_06580	0.55	-1.0
1,465,628	-		AO353_06580	0.55	+0.5
1,465,628	-		AO353_06580	0.55	-0.1
1,465,762	+		AO353_06580	0.84	-0.3
1,465,762	+		AO353_06580	0.84	+0.3
1,465,763	-		AO353_06580	0.85	-0.6
1,465,804	+				-0.7
1,465,805	-				+0.9
1,465,805	-				-1.4
1,465,805	-				+1.0
1,465,836	+				-1.3
1,465,836	+				+0.3
1,465,837	-				-3.0
1,465,837	-				-1.2
1,465,837	-				+1.0
1,465,927	+				-0.3
1,465,927	+				-1.0
1,465,927	+				+0.3
1,465,927	+				-0.6
1,465,927	+				-0.7
1,465,927	+				-0.1
1,465,927	+				-1.5
1,465,927	+				+0.6
1,465,928	-				-0.5
1,465,928	-				-0.8
1,465,928	-				-1.5
1,465,928	-				-0.5
1,465,928	-				-1.3
1,465,928	-				+1.7
1,465,928	-				-0.7
1,465,928	-				-0.3
1,465,928	-				-0.1
1,465,931	+				+1.3
1,465,931	+				-1.0
1,465,931	+				-0.3
1,465,931	+				-0.5
1,465,931	+				+1.5
1,465,931	+				-1.9
1,465,931	+				-1.0
1,465,932	-				+0.6
1,465,932	-				+0.2
1,465,932	-				+0.7
1,465,932	-				-0.3
1,465,932	-				+0.5
1,465,932	-				-0.0
1,465,932	-				-1.0
1,465,932	-				-0.9
1,465,946	-				+0.3
1,465,995	+				+1.3
1,465,995	+				-0.0
1,465,995	+				-0.1
1,465,995	+				-0.7
1,465,995	+				+0.4
1,465,995	+				-0.2
1,465,995	+				+0.3
1,465,995	+				+1.7
1,465,995	+				-0.5
1,465,995	+				-0.3
1,465,995	+				+0.6
1,465,995	+				-0.5
1,465,995	+				-2.2
1,465,995	+				-0.8
1,465,995	+				+0.6
1,465,995	+				-0.3
1,465,995	+				+0.3
1,465,995	+				-0.3
1,465,995	+				-0.7
1,465,996	-				-0.0
1,465,996	-				+1.5
1,465,996	-				-1.2
1,465,996	-				-0.6
1,465,996	-				-2.2
1,465,996	-				-0.7
1,465,996	-				+1.6
1,465,996	-				+0.5
1,465,996	-				+0.3
1,465,996	-				-0.7
1,465,996	-				-1.0
1,465,996	-				+0.1
1,465,996	-				-0.2
1,465,996	-				-0.1
1,465,996	-				+0.5
1,465,996	-				+0.3
1,465,996	-				-2.8
1,466,041	+				+0.7
1,466,042	-				-2.7
1,466,075	+				-1.1
1,466,075	+				+0.7
1,466,075	+				+0.6
1,466,075	+				-0.0
1,466,075	+				-1.3
1,466,076	-				+1.3
1,466,076	-				-1.7
1,466,076	-				-0.8
1,466,076	-				-0.9
1,466,076	-				-1.7
1,466,076	-				-1.0
1,466,076	-				+0.2
1,466,077	+				+1.3
1,466,077	+				+0.3
1,466,078	-				-0.3
1,466,099	+				-1.0
1,466,099	+				-0.7
1,466,099	+				+0.7
1,466,099	+				+0.7
1,466,100	-				-1.5
1,466,100	-				-0.1
1,466,100	-				+2.3
1,466,139	+				-0.7
1,466,140	-				+0.3
1,466,140	-				-1.8
1,466,140	-				-1.7
1,466,140	-				-1.2
1,466,208	+				+1.7
1,466,208	+				-1.0
1,466,209	-				-1.0
1,466,209	-				-0.3
1,466,209	-				+1.3
1,466,209	-				-1.0
1,466,209	-				+1.0
1,466,209	-				-1.9
1,466,228	+				-0.8
1,466,228	+				+0.5
1,466,229	-				-2.0
1,466,229	-				+0.3
1,466,229	-				-2.5
1,466,252	+		AO353_06585	0.10	-2.5
1,466,267	+		AO353_06585	0.12	-1.2
1,466,267	+		AO353_06585	0.12	-0.3
1,466,268	-		AO353_06585	0.12	-0.3
1,466,268	-		AO353_06585	0.12	-1.3
1,466,268	-		AO353_06585	0.12	-0.7
1,466,268	-		AO353_06585	0.12	-1.7
1,466,268	-		AO353_06585	0.12	+1.3
1,466,268	-		AO353_06585	0.12	-2.6
1,466,268	-		AO353_06585	0.12	-2.3
1,466,441	+		AO353_06585	0.39	-0.7
1,466,441	+		AO353_06585	0.39	-1.3
1,466,441	+		AO353_06585	0.39	-2.2
1,466,441	+		AO353_06585	0.39	-0.3
1,466,441	+		AO353_06585	0.39	-0.7
1,466,441	+		AO353_06585	0.39	-0.3
1,466,442	-		AO353_06585	0.39	+1.3
1,466,442	-		AO353_06585	0.39	+0.1
1,466,442	-		AO353_06585	0.39	-2.1
1,466,442	-		AO353_06585	0.39	-1.0
1,466,442	-		AO353_06585	0.39	+0.5
1,466,442	-		AO353_06585	0.39	-1.3
1,466,442	-		AO353_06585	0.39	-0.2
1,466,442	-		AO353_06585	0.39	-1.6
1,466,442	-		AO353_06585	0.39	-0.1
1,466,510	+		AO353_06585	0.49	-2.5
1,466,534	+		AO353_06585	0.53	-0.7
1,466,534	+		AO353_06585	0.53	-2.3
1,466,534	+		AO353_06585	0.53	+0.5
1,466,534	+		AO353_06585	0.53	-0.3
1,466,534	+		AO353_06585	0.53	-1.6
1,466,534	+		AO353_06585	0.53	+0.5
1,466,534	+		AO353_06585	0.53	+0.3
1,466,535	-		AO353_06585	0.53	-1.9
1,466,535	-		AO353_06585	0.53	-0.7
1,466,535	-		AO353_06585	0.53	-1.0
1,466,616	+		AO353_06585	0.65	-1.5
1,466,699	+		AO353_06585	0.78	-1.3
1,466,748	+		AO353_06585	0.86	-0.7
1,466,881	+				+0.8
1,466,881	+				-0.7
1,466,882	-				+0.3
1,467,116	+		AO353_06590	0.33	+0.3
1,467,117	-		AO353_06590	0.33	-1.3
1,467,117	-		AO353_06590	0.33	-0.7
1,467,293	+		AO353_06590	0.55	+0.3
1,467,293	+		AO353_06590	0.55	+0.6
1,467,293	+		AO353_06590	0.55	-0.3
1,467,294	-		AO353_06590	0.55	+1.3
1,467,294	-		AO353_06590	0.55	-3.4
1,467,417	-		AO353_06590	0.70	+0.5
1,467,427	+		AO353_06590	0.71	-0.1
1,467,428	-		AO353_06590	0.71	-2.0
1,467,428	-		AO353_06590	0.71	-1.5
1,467,428	-		AO353_06590	0.71	+1.1
1,467,477	-		AO353_06590	0.77	-0.8
1,467,521	+		AO353_06590	0.83	-2.2
1,467,521	+		AO353_06590	0.83	+1.6
1,467,521	+		AO353_06590	0.83	+0.7
1,467,522	-		AO353_06590	0.83	-1.5
1,467,522	-		AO353_06590	0.83	+0.1
1,467,522	-		AO353_06590	0.83	-0.5
1,467,522	-		AO353_06590	0.83	+1.1
1,467,522	-		AO353_06590	0.83	+1.3
1,467,522	-		AO353_06590	0.83	+0.7
1,467,557	+		AO353_06590	0.87	-0.5
1,467,569	+		AO353_06590	0.89	+1.9
1,467,570	-		AO353_06590	0.89	+0.0
1,467,570	-		AO353_06590	0.89	-1.2
1,467,570	-		AO353_06590	0.89	+2.3
1,467,570	-		AO353_06590	0.89	-0.9
1,467,590	+				+0.1
1,467,590	+				-1.0
1,467,591	-				+0.1
1,467,659	+				-0.9
1,467,659	+				-1.0
1,467,659	+				-0.5
1,467,660	-				-0.7
1,467,660	-				-0.3
1,467,660	-				+0.3
1,467,660	-				-1.4
1,467,660	-				-1.0
1,467,660	-				-0.4
1,467,677	+				+1.4
1,467,677	+				-1.0
1,467,677	+				+0.1
1,467,677	+				-1.1
1,467,677	+				-0.0
1,467,677	+				-0.1
1,467,678	-				-1.3
1,467,678	-				-1.0
1,467,678	-				+0.9
1,467,678	-				-1.4
1,467,678	-				-0.4
1,467,678	-				-2.0
1,467,678	-				+0.5
1,467,679	+				+0.6
1,467,679	+				+0.3
1,467,679	+				+0.1
1,467,679	+				+1.3
1,467,679	+				-0.3
1,467,679	+				+0.3
1,467,679	+				+1.0
1,467,679	+				+0.5
1,467,680	-				-1.5
1,467,680	-				-0.0
1,467,680	-				+0.7
1,467,680	-				+1.3
1,467,691	+				+0.6
1,467,691	+				+0.6
1,467,691	+				-1.2
1,467,691	+				-0.7
1,467,712	+				+0.7
1,467,712	+				-0.7
1,467,712	+				-1.3
1,467,718	+				+0.3
1,467,718	+				-0.7
1,467,718	+				-0.1
1,467,718	+				+0.1
1,467,720	+				+2.3
1,467,720	+				-0.1
1,467,767	+				+0.4
1,467,767	+				-1.3