Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04735

Experiment: 1-ethyl-3-methylimidazolium lysine 10.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 10.5 mM
1,024,168	+				+1.3
1,024,169	-				+0.6
1,024,169	-				-0.7
1,024,169	-				+1.2
1,024,175	+				-0.9
1,024,175	+				+0.3
1,024,175	+				-0.9
1,024,175	+				+0.4
1,024,176	-				+1.2
1,024,176	-				+0.9
1,024,187	+				-0.2
1,024,187	+				-0.1
1,024,187	+				-0.1
1,024,188	-				-0.3
1,024,225	+				+0.4
1,024,232	+				-0.3
1,024,278	+		AO353_04730	0.16	-1.2
1,024,279	-		AO353_04730	0.16	-2.0
1,024,321	-		AO353_04730	0.22	+0.1
1,024,321	-		AO353_04730	0.22	-0.3
1,024,321	-		AO353_04730	0.22	+0.6
1,024,321	-		AO353_04730	0.22	-1.9
1,024,321	-		AO353_04730	0.22	+1.5
1,024,321	-		AO353_04730	0.22	-0.8
1,024,321	-		AO353_04730	0.22	-0.9
1,024,331	+		AO353_04730	0.24	+0.6
1,024,425	+		AO353_04730	0.38	-1.7
1,024,426	-		AO353_04730	0.38	-1.2
1,024,479	+		AO353_04730	0.46	-0.9
1,024,479	+		AO353_04730	0.46	-1.6
1,024,480	-		AO353_04730	0.46	-2.2
1,024,482	+		AO353_04730	0.47	-0.9
1,024,482	+		AO353_04730	0.47	+0.3
1,024,482	+		AO353_04730	0.47	+1.4
1,024,482	+		AO353_04730	0.47	-1.2
1,024,482	+		AO353_04730	0.47	+0.1
1,024,482	+		AO353_04730	0.47	-1.1
1,024,483	-		AO353_04730	0.47	+0.9
1,024,483	-		AO353_04730	0.47	-0.7
1,024,483	-		AO353_04730	0.47	-0.2
1,024,483	-		AO353_04730	0.47	-0.5
1,024,483	-		AO353_04730	0.47	-1.2
1,024,483	-		AO353_04730	0.47	-0.6
1,024,483	-		AO353_04730	0.47	-1.1
1,024,483	-		AO353_04730	0.47	-2.2
1,024,764	+				+0.6
1,024,764	+				-0.9
1,024,764	+				-0.3
1,024,764	+				-0.2
1,024,764	+				-0.5
1,024,805	-				+1.2
1,024,861	+				-0.2
1,024,861	+				+0.7
1,024,862	-				+0.2
1,024,862	-				-1.3
1,024,862	-				-0.1
1,024,862	-				-1.1
1,024,862	-				-0.6
1,024,862	-				-0.9
1,024,862	-				+0.6
1,024,866	-				+3.1
1,024,882	+				+1.1
1,024,882	+				+1.1
1,024,882	+				+1.7
1,024,882	+				-1.1
1,024,883	-				+0.5
1,024,883	-				-0.3
1,024,883	-				-1.5
1,024,883	-				+0.1
1,024,883	-				-0.3
1,024,883	-				+1.1
1,024,883	-				-0.8
1,024,976	-				+0.5
1,024,976	-				+0.2
1,024,984	+				-2.4
1,024,984	+				+0.1
1,024,984	+				-1.6
1,024,985	-				-2.5
1,024,985	-				+1.1
1,024,985	-				-0.1
1,025,072	+				-2.1
1,025,072	+				+1.1
1,025,072	+				+1.7
1,025,072	+				+0.4
1,025,073	-				-1.0
1,025,073	-				-0.2
1,025,073	-				+0.7
1,025,073	-				+1.1
1,025,073	-				-1.5
1,025,109	-				-0.8
1,025,109	-				+1.1
1,025,132	+				+1.4
1,025,132	+				-0.4
1,025,133	-				+0.3
1,025,133	-				+0.4
1,025,479	+		AO353_04735	0.23	+0.9
1,025,479	+		AO353_04735	0.23	-1.2
1,025,479	+		AO353_04735	0.23	+0.1
1,025,479	+		AO353_04735	0.23	-1.9
1,025,479	+		AO353_04735	0.23	-2.1
1,025,522	+		AO353_04735	0.26	+1.4
1,025,595	+		AO353_04735	0.31	+1.7
1,025,596	-		AO353_04735	0.31	+0.1
1,025,596	-		AO353_04735	0.31	-0.6
1,025,596	-		AO353_04735	0.31	+0.1
1,025,597	+		AO353_04735	0.32	+0.7
1,025,597	+		AO353_04735	0.32	-1.2
1,025,597	+		AO353_04735	0.32	+0.7
1,025,597	+		AO353_04735	0.32	+0.1
1,025,598	-		AO353_04735	0.32	-0.5
1,025,598	-		AO353_04735	0.32	+0.4
1,025,707	-		AO353_04735	0.39	-0.9
1,025,784	+		AO353_04735	0.44	+0.2
1,025,784	+		AO353_04735	0.44	-0.8
1,025,784	+		AO353_04735	0.44	-0.7
1,025,784	+		AO353_04735	0.44	+0.0
1,025,784	+		AO353_04735	0.44	-0.8
1,025,784	+		AO353_04735	0.44	+0.7
1,025,784	+		AO353_04735	0.44	+0.7
1,025,784	+		AO353_04735	0.44	+1.8
1,025,784	+		AO353_04735	0.44	-0.5
1,025,785	-		AO353_04735	0.44	-0.9
1,025,785	-		AO353_04735	0.44	+0.3
1,025,785	-		AO353_04735	0.44	+0.2
1,025,785	-		AO353_04735	0.44	-1.6
1,025,785	-		AO353_04735	0.44	-0.3
1,025,785	-		AO353_04735	0.44	+0.3
1,025,785	-		AO353_04735	0.44	-1.7
1,025,813	+		AO353_04735	0.46	+0.6
1,026,008	+		AO353_04735	0.60	-2.6
1,026,237	+		AO353_04735	0.76	-0.5
1,026,238	-		AO353_04735	0.76	+1.1
1,026,414	+		AO353_04735	0.88	-0.5
1,026,414	+		AO353_04735	0.88	-0.5
1,026,414	+		AO353_04735	0.88	+0.9
1,026,414	+		AO353_04735	0.88	-0.5
1,026,414	+		AO353_04735	0.88	+0.3
1,026,414	+		AO353_04735	0.88	+0.7
1,026,415	-		AO353_04735	0.88	+1.0
1,026,415	-		AO353_04735	0.88	+0.3
1,026,415	-		AO353_04735	0.88	+0.9
1,026,415	-		AO353_04735	0.88	-1.5
1,026,415	-		AO353_04735	0.88	+1.1
1,026,415	-		AO353_04735	0.88	-0.5
1,026,415	-		AO353_04735	0.88	+0.3
1,026,415	-		AO353_04735	0.88	-0.5
1,026,495	+				+0.5
1,026,495	+				+1.7
1,026,495	+				+0.6
1,026,495	+				-1.9
1,026,496	-				-0.9
1,026,496	-				+0.3
1,026,496	-				+0.7
1,026,530	+				+0.8
1,026,530	+				+0.1
1,026,530	+				-0.1
1,026,530	+				-0.3
1,026,530	+				-1.8
1,026,530	+				+0.5
1,026,530	+				-1.1
1,026,530	+				-0.9
1,026,531	-				-1.3
1,026,531	-				-0.7
1,026,531	-				-0.7
1,026,531	-				+0.1
1,026,531	-				-0.4
1,026,534	+				-0.7
1,026,534	+				-0.9
1,026,534	+				-0.3
1,026,535	-				+0.1
1,026,535	-				+0.1
1,026,535	-				-0.2
1,026,545	+				+0.4
1,026,599	+				+2.3
1,026,608	+				-0.2
1,026,609	-				+0.1
1,026,609	-				-0.9
1,026,609	-				+0.1
1,026,609	-				-0.4
1,026,679	+				-1.2
1,026,731	+				+0.4
1,026,731	+				-0.1
1,026,732	-				-1.4
1,026,746	-				-1.7
1,026,819	-				-0.2
1,026,819	-				-0.2
1,026,932	+				+0.5
1,027,027	+		AO353_04740	0.12	+0.1
1,027,047	+		AO353_04740	0.13	-0.5
1,027,048	-		AO353_04740	0.13	+0.5
1,027,055	-		AO353_04740	0.13	-0.7
1,027,055	-		AO353_04740	0.13	+1.5
1,027,055	-		AO353_04740	0.13	-2.1
1,027,129	+		AO353_04740	0.16	-1.1
1,027,140	+		AO353_04740	0.16	+0.1
1,027,142	+		AO353_04740	0.16	+0.6
1,027,142	+		AO353_04740	0.16	-0.7
1,027,153	+		AO353_04740	0.16	+0.9
1,027,153	+		AO353_04740	0.16	+0.1
1,027,154	-		AO353_04740	0.16	-0.5
1,027,154	-		AO353_04740	0.16	+0.7
1,027,194	-		AO353_04740	0.18	-0.5
1,027,194	-		AO353_04740	0.18	+0.1
1,027,194	-		AO353_04740	0.18	-0.1
1,027,195	+		AO353_04740	0.18	-1.6
1,027,196	-		AO353_04740	0.18	+1.1
1,027,196	-		AO353_04740	0.18	+0.1
1,027,218	-		AO353_04740	0.19	-1.7
1,027,220	+		AO353_04740	0.19	-0.8
1,027,220	+		AO353_04740	0.19	-2.5
1,027,221	-		AO353_04740	0.19	-0.5
1,027,221	-		AO353_04740	0.19	+0.4
1,027,221	-		AO353_04740	0.19	+0.9
1,027,221	-		AO353_04740	0.19	+2.7
1,027,221	-		AO353_04740	0.19	-1.2
1,027,249	+		AO353_04740	0.20	+0.7
1,027,249	+		AO353_04740	0.20	+0.2
1,027,250	-		AO353_04740	0.20	+0.1
1,027,251	+		AO353_04740	0.20	-1.1
1,027,252	-		AO353_04740	0.20	+0.4
1,027,286	+		AO353_04740	0.21	-0.2
1,027,286	+				+0.1
1,027,286	+		AO353_04740	0.21	-0.7
1,027,286	+		AO353_04740	0.21	-0.9
1,027,287	-		AO353_04740	0.21	-0.7
1,027,287	-		AO353_04740	0.21	+1.7
1,027,288	+		AO353_04740	0.21	-0.2
1,027,289	-		AO353_04740	0.21	-0.2
1,027,289	-		AO353_04740	0.21	+0.1
1,027,289	-		AO353_04740	0.21	+0.2
1,027,301	+		AO353_04740	0.22	-0.9
1,027,348	+		AO353_04740	0.24	+3.7
1,027,349	-		AO353_04740	0.24	-1.2
1,027,590	+		AO353_04740	0.32	-0.5
1,027,590	+		AO353_04740	0.32	-1.7
1,027,590	+		AO353_04740	0.32	+1.5