Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2659
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
3,172,025 | - | Shewana3_2657 | 0.90 | -0.7 | |
3,172,897 | + | -1.1 | |||
3,172,905 | - | -0.3 | |||
3,173,565 | - | Shewana3_2659 | 0.25 | -0.3 | |
3,175,879 | + | clpX | Shewana3_2660 | 0.32 | +0.9 |
3,175,924 | - | clpX | Shewana3_2660 | 0.36 | -4.8 |
3,175,924 | - | clpX | Shewana3_2660 | 0.36 | -6.0 |
3,175,924 | - | clpX | Shewana3_2660 | 0.36 | -4.8 |
3,176,073 | - | clpX | Shewana3_2660 | 0.47 | -4.8 |
Or see this region's nucleotide sequence