Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_2369 and Shewana3_2370 are separated by 252 nucleotides Shewana3_2370 and Shewana3_2371 are separated by 263 nucleotides Shewana3_2371 and Shewana3_2372 are separated by 2 nucleotides
Shewana3_2369: Shewana3_2369 - beta-lactamase domain-containing protein (RefSeq), at 2,847,156 to 2,847,959
_2369
Shewana3_2370: Shewana3_2370 - MltD domain-containing protein (RefSeq), at 2,848,212 to 2,849,759
_2370
Shewana3_2371: Shewana3_2371 - intracellular proteinase inhibitor domain-containing protein (RefSeq), at 2,850,023 to 2,850,682
_2371
Shewana3_2372: Shewana3_2372 - AsmA protein (RefSeq), at 2,850,685 to 2,852,505
_2372
Position (kb)
2848
2849
2850 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2847.372 kb on - strand, within Shewana3_2369 at 2847.455 kb on + strand, within Shewana3_2369 at 2847.492 kb on + strand, within Shewana3_2369 at 2847.501 kb on - strand, within Shewana3_2369 at 2847.639 kb on - strand, within Shewana3_2369 at 2847.639 kb on - strand, within Shewana3_2369 at 2847.811 kb on + strand, within Shewana3_2369 at 2847.856 kb on + strand, within Shewana3_2369 at 2847.922 kb on + strand at 2848.279 kb on + strand at 2848.287 kb on - strand at 2848.345 kb on - strand at 2848.708 kb on + strand, within Shewana3_2370 at 2849.058 kb on - strand, within Shewana3_2370 at 2849.475 kb on - strand, within Shewana3_2370 at 2849.769 kb on - strand at 2849.804 kb on + strand at 2850.048 kb on - strand at 2850.202 kb on + strand, within Shewana3_2371 at 2850.385 kb on + strand, within Shewana3_2371 at 2850.554 kb on - strand, within Shewana3_2371 at 2850.737 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 2,847,372 - Shewana3_2369 0.27 +0.9 2,847,455 + Shewana3_2369 0.37 +2.5 2,847,492 + Shewana3_2369 0.42 +0.9 2,847,501 - Shewana3_2369 0.43 +1.9 2,847,639 - Shewana3_2369 0.60 -0.1 2,847,639 - Shewana3_2369 0.60 -0.3 2,847,811 + Shewana3_2369 0.81 -2.1 2,847,856 + Shewana3_2369 0.87 +0.2 2,847,922 + -0.7 2,848,279 + -0.7 2,848,287 - +0.9 2,848,345 - +0.9 2,848,708 + Shewana3_2370 0.32 +0.9 2,849,058 - Shewana3_2370 0.55 +1.9 2,849,475 - Shewana3_2370 0.82 +0.9 2,849,769 - +0.9 2,849,804 + -1.1 2,850,048 - -0.2 2,850,202 + Shewana3_2371 0.27 -0.1 2,850,385 + Shewana3_2371 0.55 +0.9 2,850,554 - Shewana3_2371 0.80 -0.1 2,850,737 - +0.9
Or see this region's nucleotide sequence