Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2365
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
2,843,145 | - | Shewana3_2364 | 0.57 | +0.0 | |
2,843,155 | - | Shewana3_2364 | 0.58 | -1.0 | |
2,843,392 | - | Shewana3_2364 | 0.78 | +0.2 | |
2,843,462 | + | Shewana3_2364 | 0.84 | -1.4 | |
2,843,837 | + | +1.6 | |||
2,843,837 | + | -0.1 | |||
2,844,870 | - | rnhA | Shewana3_2366 | 0.13 | +0.3 |
2,845,080 | + | rnhA | Shewana3_2366 | 0.57 | -1.9 |
2,845,433 | - | Shewana3_2367 | 0.12 | -2.1 | |
2,845,438 | - | Shewana3_2367 | 0.13 | -0.1 | |
2,845,471 | - | Shewana3_2367 | 0.16 | -0.7 | |
2,845,506 | + | Shewana3_2367 | 0.20 | +0.9 |
Or see this region's nucleotide sequence