Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2265
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
2,725,832 | - | Shewana3_2264 | 0.56 | +1.0 | |
2,725,900 | - | Shewana3_2264 | 0.60 | -0.5 | |
2,726,586 | - | +2.0 | |||
2,726,764 | + | +1.0 | |||
2,726,830 | - | -1.0 | |||
2,727,016 | - | Shewana3_2265 | 0.36 | -1.4 | |
2,727,078 | - | Shewana3_2265 | 0.45 | -1.4 | |
2,727,084 | - | Shewana3_2265 | 0.46 | +1.0 | |
2,727,248 | - | Shewana3_2265 | 0.73 | -1.0 | |
2,727,561 | + | +1.0 | |||
2,727,610 | + | -2.1 | |||
2,727,685 | + | Shewana3_2266 | 0.14 | -0.0 | |
2,727,687 | + | Shewana3_2266 | 0.14 | -1.2 | |
2,727,906 | + | Shewana3_2266 | 0.30 | +1.0 | |
2,727,954 | + | Shewana3_2266 | 0.34 | +0.4 | |
2,728,241 | + | Shewana3_2266 | 0.54 | -0.2 | |
2,728,398 | + | Shewana3_2266 | 0.66 | +2.1 |
Or see this region's nucleotide sequence