Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_1566 and Shewana3_1567 are separated by 241 nucleotides Shewana3_1567 and Shewana3_1568 are separated by 26 nucleotides
Shewana3_1566: Shewana3_1566 - putative sulfate transport protein CysZ (RefSeq), at 1,830,178 to 1,830,957
_1566
Shewana3_1567: Shewana3_1567 - chromosome segregation protein SMC (RefSeq), at 1,831,199 to 1,834,627
_1567
Shewana3_1568: Shewana3_1568 - cell division protein ZipA (RefSeq), at 1,834,654 to 1,835,694
_1568
Position (kb)
1831
1832
1833
1834
1835 Strain fitness (log2 ratio)
-1
0
1
2 at 1830.638 kb on + strand, within Shewana3_1566 at 1830.638 kb on + strand, within Shewana3_1566 at 1830.669 kb on - strand, within Shewana3_1566 at 1830.699 kb on + strand, within Shewana3_1566 at 1830.826 kb on - strand, within Shewana3_1566 at 1830.836 kb on - strand, within Shewana3_1566 at 1830.888 kb on + strand at 1830.926 kb on - strand at 1831.317 kb on - strand at 1831.610 kb on - strand, within Shewana3_1567 at 1831.683 kb on + strand, within Shewana3_1567 at 1831.729 kb on - strand, within Shewana3_1567 at 1831.751 kb on + strand, within Shewana3_1567 at 1831.916 kb on - strand, within Shewana3_1567 at 1831.956 kb on + strand, within Shewana3_1567 at 1831.979 kb on + strand, within Shewana3_1567 at 1831.987 kb on - strand, within Shewana3_1567 at 1832.066 kb on + strand, within Shewana3_1567 at 1832.149 kb on + strand, within Shewana3_1567 at 1832.248 kb on - strand, within Shewana3_1567 at 1832.930 kb on - strand, within Shewana3_1567 at 1833.097 kb on + strand, within Shewana3_1567 at 1833.127 kb on + strand, within Shewana3_1567 at 1833.144 kb on + strand, within Shewana3_1567 at 1833.200 kb on - strand, within Shewana3_1567 at 1833.256 kb on + strand, within Shewana3_1567 at 1833.323 kb on + strand, within Shewana3_1567 at 1833.414 kb on + strand, within Shewana3_1567 at 1833.422 kb on - strand, within Shewana3_1567 at 1833.473 kb on + strand, within Shewana3_1567 at 1833.535 kb on - strand, within Shewana3_1567 at 1833.599 kb on + strand, within Shewana3_1567 at 1833.672 kb on + strand, within Shewana3_1567 at 1833.680 kb on - strand, within Shewana3_1567 at 1833.750 kb on - strand, within Shewana3_1567 at 1833.775 kb on + strand, within Shewana3_1567 at 1833.935 kb on + strand, within Shewana3_1567 at 1834.026 kb on + strand, within Shewana3_1567 at 1834.312 kb on - strand at 1834.485 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 1,830,638 + Shewana3_1566 0.59 +1.0 1,830,638 + Shewana3_1566 0.59 +1.0 1,830,669 - Shewana3_1566 0.63 +0.2 1,830,699 + Shewana3_1566 0.67 +1.0 1,830,826 - Shewana3_1566 0.83 +0.6 1,830,836 - Shewana3_1566 0.84 -0.2 1,830,888 + +1.0 1,830,926 - +1.0 1,831,317 - +2.0 1,831,610 - Shewana3_1567 0.12 -0.0 1,831,683 + Shewana3_1567 0.14 +0.4 1,831,729 - Shewana3_1567 0.15 +1.0 1,831,751 + Shewana3_1567 0.16 -0.6 1,831,916 - Shewana3_1567 0.21 -0.0 1,831,956 + Shewana3_1567 0.22 -0.0 1,831,979 + Shewana3_1567 0.23 +0.4 1,831,987 - Shewana3_1567 0.23 -0.0 1,832,066 + Shewana3_1567 0.25 -0.0 1,832,149 + Shewana3_1567 0.28 +1.4 1,832,248 - Shewana3_1567 0.31 +1.0 1,832,930 - Shewana3_1567 0.50 +1.0 1,833,097 + Shewana3_1567 0.55 -0.4 1,833,127 + Shewana3_1567 0.56 +1.0 1,833,144 + Shewana3_1567 0.57 +0.4 1,833,200 - Shewana3_1567 0.58 +1.4 1,833,256 + Shewana3_1567 0.60 -0.7 1,833,323 + Shewana3_1567 0.62 +2.2 1,833,414 + Shewana3_1567 0.65 -1.2 1,833,422 - Shewana3_1567 0.65 +1.0 1,833,473 + Shewana3_1567 0.66 +0.6 1,833,535 - Shewana3_1567 0.68 -0.4 1,833,599 + Shewana3_1567 0.70 -0.0 1,833,672 + Shewana3_1567 0.72 -0.0 1,833,680 - Shewana3_1567 0.72 -0.6 1,833,750 - Shewana3_1567 0.74 +1.0 1,833,775 + Shewana3_1567 0.75 -0.4 1,833,935 + Shewana3_1567 0.80 +1.0 1,834,026 + Shewana3_1567 0.82 +1.0 1,834,312 - +1.0 1,834,485 + +1.0
Or see this region's nucleotide sequence