Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0807
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
930,444 | + | Shewana3_0806 | 0.38 | +0.1 | |
930,488 | + | Shewana3_0806 | 0.41 | -0.8 | |
931,217 | + | -0.4 | |||
931,217 | + | +0.1 | |||
931,340 | + | Shewana3_0807 | 0.14 | +0.1 | |
931,394 | - | Shewana3_0807 | 0.26 | +0.3 | |
931,427 | + | Shewana3_0807 | 0.33 | +2.1 | |
931,442 | + | Shewana3_0807 | 0.37 | +0.1 | |
931,458 | - | Shewana3_0807 | 0.40 | +0.0 | |
931,545 | - | Shewana3_0807 | 0.60 | -1.7 | |
931,788 | + | +0.8 | |||
931,796 | - | +0.1 | |||
931,796 | - | -0.9 | |||
931,796 | - | +0.7 | |||
931,891 | + | -0.7 | |||
931,899 | - | -0.0 | |||
931,899 | - | +0.6 | |||
931,899 | - | -0.2 | |||
931,910 | + | +1.5 | |||
931,996 | + | Shewana3_0808 | 0.17 | -0.4 | |
932,042 | - | Shewana3_0808 | 0.20 | +0.5 | |
932,071 | + | Shewana3_0808 | 0.23 | -2.1 | |
932,172 | - | Shewana3_0808 | 0.31 | +1.1 | |
932,511 | - | Shewana3_0808 | 0.58 | -1.3 | |
932,528 | + | Shewana3_0808 | 0.59 | -0.1 | |
932,567 | - | Shewana3_0808 | 0.62 | -0.6 | |
932,583 | + | Shewana3_0808 | 0.64 | -0.2 | |
932,631 | + | Shewana3_0808 | 0.67 | -0.6 |
Or see this region's nucleotide sequence