Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0783 and Shewana3_0784 are separated by 151 nucleotides Shewana3_0784 and Shewana3_0785 are separated by 69 nucleotides Shewana3_0785 and Shewana3_0786 are separated by 33 nucleotides
Shewana3_0783: Shewana3_0783 - major facilitator transporter (RefSeq), at 904,676 to 906,067
_0783
Shewana3_0784: Shewana3_0784 - hypothetical protein (RefSeq), at 906,219 to 906,539
_0784
Shewana3_0785: Shewana3_0785 - peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq), at 906,609 to 907,196
_0785
Shewana3_0786: Shewana3_0786 - hypothetical protein (RefSeq), at 907,230 to 907,808
_0786
Position (kb) 906
907 Strain fitness (log2 ratio) -1
0
1 at 905.269 kb on - strand, within Shewana3_0783 at 905.759 kb on - strand, within Shewana3_0783 at 905.872 kb on - strand, within Shewana3_0783 at 906.207 kb on - strand at 906.212 kb on + strand at 906.217 kb on + strand at 906.217 kb on + strand at 906.230 kb on + strand at 906.302 kb on + strand, within Shewana3_0784 at 906.578 kb on + strand at 906.586 kb on - strand at 906.752 kb on - strand, within Shewana3_0785 at 906.946 kb on - strand, within Shewana3_0785 at 907.166 kb on + strand at 907.406 kb on - strand, within Shewana3_0786
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 905,269 - Shewana3_0783 0.43 +0.0 905,759 - Shewana3_0783 0.78 -0.2 905,872 - Shewana3_0783 0.86 -1.0 906,207 - -0.5 906,212 + +0.6 906,217 + -1.3 906,217 + +0.4 906,230 + -1.0 906,302 + Shewana3_0784 0.26 -1.0 906,578 + +0.0 906,586 - -0.1 906,752 - Shewana3_0785 0.24 -0.3 906,946 - Shewana3_0785 0.57 +0.1 907,166 + +0.2 907,406 - Shewana3_0786 0.30 -0.3
Or see this region's nucleotide sequence